RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 RASSF1Q9NS23 344 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 SIDT1Q9NXL6 827 aaKnown RBP26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 ZNF226Q9NYT6 803 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 DYRK3O43781 588 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 IGKV3-11P04433 115 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 SLC37A1P57057 533 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 CDC42P60953 191 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 XAF1Q6GPH4 301 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 GDF7Q7Z4P5 450 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 ZSCAN1Q8NBB4 408 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 ACOT11Q8WXI4 607 aaPredicted RBP26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 SGCDQ92629 289 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 TSLPQ969D9 159 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 SLC41A3Q96GZ6 507 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 CCDC74BQ96LY2 380 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 SLC46A1Q96NT5 459 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 NODALQ96S42 347 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 CCNB1IP1Q9NPC3 277 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 AASSQ9UDR5 926 aa26.31■■□□□ 1.8
CTDNEP1-210ENST00000574322 FER1L5A0AVI2 2057 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 IGLV3-12A0A075B6K2 115 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 NPIPA5A0A0B4J1W7 369 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 NPIPA7E9PJI5 369 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 H3BSA7 217 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 MPZL2O60487 215 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 ONECUT2O95948 504 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 THY1P04216 161 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 NPIPA8P0DM63 369 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 KRT20P35900 424 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 PSMD4P55036 377 aaKnown RBP26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 PMS2P3Q13401 168 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 CPEB4Q17RY0 729 aaKnown RBP eCLIP26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 STPG1Q5TH74 334 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 PLPP5Q8NEB5 264 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 IPCEF1Q8WWN9 437 aaPredicted RBP26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 OIT3Q8WWZ8 545 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 ITPAQ9BY32 194 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 PNO1Q9NRX1 252 aaKnown RBP26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 TESQ9UGI8 421 aaKnown RBP26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 CBLCQ9ULV8 474 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 CFL2Q9Y281 166 aa26.3■■□□□ 1.8
CTDNEP1-210ENST00000574322 FLRT2O43155 660 aa26.29■■□□□ 1.8
CTDNEP1-210ENST00000574322 GRK6P43250 576 aa26.29■■□□□ 1.8
CTDNEP1-210ENST00000574322 EFNA3P52797 238 aa26.29■■□□□ 1.8
CTDNEP1-210ENST00000574322 HOXC5Q00444 222 aa26.29■■□□□ 1.8
CTDNEP1-210ENST00000574322 PLAURQ03405 335 aa26.29■■□□□ 1.8
CTDNEP1-210ENST00000574322 MINDY4Q4G0A6 757 aa26.29■■□□□ 1.8
CTDNEP1-210ENST00000574322 VWA2Q5GFL6 755 aa26.29■■□□□ 1.8
CTDNEP1-210ENST00000574322 C1orf189Q5VU69 101 aa26.29■■□□□ 1.8
CTDNEP1-210ENST00000574322 SLX4IPQ5VYV7 408 aa26.29■■□□□ 1.8
CTDNEP1-210ENST00000574322 DBX2Q6ZNG2 339 aa26.29■■□□□ 1.8
CTDNEP1-210ENST00000574322 COX15Q7KZN9 410 aa26.29■■□□□ 1.8
CTDNEP1-210ENST00000574322 SLC22A11Q9NSA0 550 aa26.29■■□□□ 1.8
CTDNEP1-210ENST00000574322 COL5A1P20908 1838 aaPredicted RBP26.29■■□□□ 1.8
CTDNEP1-210ENST00000574322 DDAH2O95865 285 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 CD59P13987 128 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 IDH2P48735 452 aaKnown RBP26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 SMN1Q16637 294 aaKnown RBP26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 SLITRK4Q8IW52 837 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 GNPDA2Q8TDQ7 276 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 OR6C1Q96RD1 312 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 YIPF3Q9GZM5 350 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 RARRES3Q9UL19 164 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 NTNG1Q9Y2I2 539 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 TRAPPC13A5PLN9 417 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 PTGES3LE9PB15 166 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 NTN3O00634 580 aaPredicted RBP26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 PPICP45877 212 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 GSSP48637 474 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 DAB2P98082 770 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 PDZK1Q5T2W1 519 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 BPHLQ86WA6 291 aaPredicted RBP26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 P3H2Q8IVL5 708 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 CCDC103Q8IW40 242 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 CMIPQ8IY22 773 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 ALDH16A1Q8IZ83 802 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 NLGN4XQ8N0W4 816 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 BCORP1Q8N888 145 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 ZNF721Q8TF20 911 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 SIGLEC11Q96RL6 698 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 ST6GALNAC1Q9NSC7 600 aaPredicted RBP26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 C14orf105Q9NVL8 296 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 IMPAD1Q9NX62 359 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 SNX5Q9Y5X3 404 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 CLCA3PQ9Y6N3 262 aa26.28■■□□□ 1.8
CTDNEP1-210ENST00000574322 ZNF701M0R085 212 aaPredicted RBP26.27■■□□□ 1.8
CTDNEP1-210ENST00000574322 ATP12AP54707 1039 aa26.27■■□□□ 1.8
CTDNEP1-210ENST00000574322 LSM11P83369 360 aaKnown RBP eCLIP26.27■■□□□ 1.8
CTDNEP1-210ENST00000574322 TUBA3CQ13748 450 aa26.27■■□□□ 1.8
CTDNEP1-210ENST00000574322 RAB39AQ14964 217 aa26.27■■□□□ 1.8
CTDNEP1-210ENST00000574322 MFSD4BQ5TF39 518 aa26.27■■□□□ 1.8
CTDNEP1-210ENST00000574322 C12orf73Q69YU5 71 aa26.27■■□□□ 1.8
CTDNEP1-210ENST00000574322 ZNF730Q6ZMV8 503 aa26.27■■□□□ 1.8
CTDNEP1-210ENST00000574322 OR14A16Q8NHC5 309 aa26.27■■□□□ 1.8
CTDNEP1-210ENST00000574322 RHBDD1Q8TEB9 315 aa26.27■■□□□ 1.8
CTDNEP1-210ENST00000574322 ART5Q96L15 291 aa26.27■■□□□ 1.8
CTDNEP1-210ENST00000574322 GPA33Q99795 319 aa26.27■■□□□ 1.8
CTDNEP1-210ENST00000574322 VN1R1Q9GZP7 353 aa26.27■■□□□ 1.8
CTDNEP1-210ENST00000574322 FAM186AA6NE01 2351 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms