RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 Q9UFV3 132 aa12.16□□□□□ -0.46
RPAIN-207ENST00000570883 BTNL2Q9UIR0 455 aa12.16□□□□□ -0.46
RPAIN-207ENST00000570883 CAMK2AQ9UQM7 478 aa12.16□□□□□ -0.46
RPAIN-207ENST00000570883 RPH3AQ9Y2J0 694 aaPredicted RBP12.16□□□□□ -0.46
RPAIN-207ENST00000570883 MRPS18CQ9Y3D5 142 aaKnown RBP12.16□□□□□ -0.46
RPAIN-207ENST00000570883 NPIPB9F8W1W9 429 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 GMFGO60234 142 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 TOXO94900 526 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 PGRP06401 933 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 HOXD4P09016 255 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-207ENST00000570883 MATN1P21941 496 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 UQCRC2P22695 453 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 CHRNB4P30926 498 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 PTGER4P35408 488 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 CDKN2CP42773 168 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 STARP49675 285 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 CLK3P49761 638 aaKnown RBP12.15□□□□□ -0.46
RPAIN-207ENST00000570883 IDH3AP50213 366 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 LHX2P50458 406 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 RNF144AP50876 292 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-207ENST00000570883 DSCR4P56555 118 aaPredicted RBP12.15□□□□□ -0.46
RPAIN-207ENST00000570883 C17orf67Q0P5P2 114 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 GSTA3Q16772 222 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.15□□□□□ -0.46
RPAIN-207ENST00000570883 SAXO2Q658L1 398 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 BHLHB9Q6PI77 547 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 OLIG3Q7RTU3 272 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 PM20D2Q8IYS1 436 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 NAXEQ8NCW5 288 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 MIPOL1Q8TD10 442 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 CA5BP1Q8WTZ4 195 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 NEURL3Q96EH8 262 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 C1GALT1C1Q96EU7 318 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 SFXN2Q96NB2 322 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 OR51I1Q9H343 314 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 SDHAF3Q9NRP4 125 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 UBQLN4Q9NRR5 601 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 COQ3Q9NZJ6 369 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 PCDHGB4Q9UN71 923 aa12.15□□□□□ -0.46
RPAIN-207ENST00000570883 ANKHD1Q8IWZ3 2542 aaKnown RBP12.15□□□□□ -0.46
RPAIN-207ENST00000570883 A0A1W2PQD3 144 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 NKX2-6A6NCS4 301 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 FAM90A27PA6NNH2 459 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 AHRRA9YTQ3 701 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 UBDO15205 165 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 OIP5O43482 229 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 NDUFB5O43674 189 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 SLC22A3O75751 556 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 EPPINO95925 133 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 CPN1P15169 458 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 HK1P19367 917 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 CHMP24386 653 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 CLDN18P56856 261 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 TFF3Q07654 80 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 FUT5Q11128 374 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 GANABQ14697 944 aaKnown RBP12.14□□□□□ -0.47
RPAIN-207ENST00000570883 RIPPLY2Q5TAB7 128 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 SP5Q6BEB4 398 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-207ENST00000570883 TNFAIP8L2Q6P589 184 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-207ENST00000570883 ARSKQ6UWY0 536 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 GLB1L3Q8NCI6 653 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-207ENST00000570883 CHDHQ8NE62 594 aaPredicted RBP12.14□□□□□ -0.47
RPAIN-207ENST00000570883 VPS37AQ8NEZ2 397 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 TNIP2Q8NFZ5 429 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 OR5M1Q8NGP8 315 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 OR10Q1Q8NGQ4 319 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 LILRB4Q8NHJ6 448 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 ASB5Q8WWX0 329 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 MAGEB18Q96M61 343 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 OR52E6Q96RD3 313 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 SDF2Q99470 211 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 ZBTB18Q99592 522 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 NPAS1Q99742 590 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 TUBA1CQ9BQE3 449 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 SLC35A5Q9BS91 424 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 UCK2Q9BZX2 261 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 TCF7L2Q9NQB0 619 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 SLC6A13Q9NSD5 602 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 ZIM2Q9NZV7 527 aa12.14□□□□□ -0.47
RPAIN-207ENST00000570883 CENPVL1A0A0U1RR11 272 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 OR2M5A3KFT3 312 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 CCDC154A6NI56 674 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 CD8B2A6NJW9 211 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 SHISA8B8ZZ34 492 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 SCDO00767 359 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 SOX30O94993 753 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 TGDSO95455 350 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 GSNP06396 782 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 ZNF708P17019 499 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 ATP6V1C1P21283 382 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 GCKP35557 465 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 MRPL19P49406 292 aaKnown RBP12.13□□□□□ -0.47
RPAIN-207ENST00000570883 AQP5P55064 265 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 ZNF117Q03924 483 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 TMEM44Q2T9K0 475 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 FLYWCH1Q4VC44 716 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 TIGD2Q4W5G0 525 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 KLHL26Q53HC5 615 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 RAET1LQ5VY80 246 aa12.13□□□□□ -0.47
RPAIN-207ENST00000570883 NSUN5P2Q63ZY6 315 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms