RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CALM2P0DP24 149 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 CALM3P0DP25 149 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 IL9P15248 144 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 TCF4P15884 667 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 CCND2P30279 289 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 UGT1A3P35503 534 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 COPB2P35606 906 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 TCF7P36402 384 aaPredicted RBP1.13□□□□□ -2.23
SMG1-212ENST00000566328 PPP5CP53041 499 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 NAPAP54920 295 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 NLRP11P59045 1033 aaKnown RBP1.13□□□□□ -2.23
SMG1-212ENST00000566328 IFI35P80217 286 aaPredicted RBP1.13□□□□□ -2.23
SMG1-212ENST00000566328 MZT1Q08AG7 82 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 TRDNQ13061 729 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 LCP2Q13094 533 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 GPM6BQ13491 265 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 KRT31Q15323 416 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 ZNF528Q3MIS6 628 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 EPC2Q52LR7 807 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 CEP55Q53EZ4 464 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 UNC50Q53HI1 259 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 TCEAL5Q5H9L2 206 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 ZNF770Q6IQ21 691 aaPredicted RBP1.13□□□□□ -2.23
SMG1-212ENST00000566328 FAM173BQ6P4H8 233 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 CFAP161Q6P656 301 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 CASC1Q6TDU7 716 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 APOOLQ6UXV4 268 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 RUFY3Q7L099 469 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 SYVN1Q86TM6 617 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 ERICH1Q86X53 443 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 MEX3DQ86XN8 651 aaKnown RBP1.13□□□□□ -2.23
SMG1-212ENST00000566328 PLA2G4DQ86XP0 818 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 ZNF547Q8IVP9 402 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 FAM219AQ8IW50 185 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 PPTC7Q8NI37 304 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 TOP1MTQ969P6 601 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 SLC25A38Q96DW6 304 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 CPB2Q96IY4 423 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 RAB40CQ96S21 281 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 PLIN2Q99541 437 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 C19orf43Q9BQ61 176 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 TRIM9Q9C026 710 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 ZNF665Q9H7R5 613 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 WRAP73Q9P2S5 460 aaPredicted RBP1.13□□□□□ -2.23
SMG1-212ENST00000566328 ZNF221Q9UK13 617 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 Q9Y3F1 56 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 HES2Q9Y543 173 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 UBIAD1Q9Y5Z9 338 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 ETV7Q9Y603 341 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 MYH9P35579 1960 aaKnown RBP1.13□□□□□ -2.23
SMG1-212ENST00000566328 TRIP11Q15643 1979 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 NBEAQ8NFP9 2946 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 LOC285556D6RIA3 1793 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 COL4A6Q14031 1691 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 CUL9Q8IWT3 2517 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 PTPRSQ13332 1948 aa1.13□□□□□ -2.23
SMG1-212ENST00000566328 LAMA4Q16363 1823 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 SMG1Q96Q15 3661 aaKnown RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 BSNQ9UPA5 3926 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 SCN10AQ9Y5Y9 1956 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 BDP1A6H8Y1 2624 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 CITO14578 2027 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 RBBP6Q7Z6E9 1792 aaKnown RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 IGLV3-22A0A075B6J6 115 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 TRBV6-6A0A0A6YYG2 114 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 PP2D1A8MPX8 630 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 I3L4J1 428 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 HIP1O00291 1037 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 UBE2CO00762 179 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 ADAM12O43184 909 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 B4GALT5O43286 388 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 SLC37A4O43826 429 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 ACSL4O60488 711 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 CABYRO75952 493 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 SLITRK3O94933 977 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 SLU7O95391 586 aaKnown RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 SLC2A10O95528 541 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 CXCL14O95715 111 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 CXCL10P02778 98 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 MYBL1P10243 752 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 SCG2P13521 617 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 KIF5BP33176 963 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 CA8P35219 290 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 CTNNB1P35222 781 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 CCR4P51679 360 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 SUCLG1P53597 346 aaKnown RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 NTHL1P78549 312 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 MRPS6P82932 125 aaKnown RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 SPAG1Q07617 926 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 MGAT3Q09327 533 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 PDE7AQ13946 482 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 BTG3Q14201 252 aaPredicted RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 PTGES3Q15185 160 aaKnown RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 LY6EQ16553 131 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 GLYR1Q49A26 553 aaPredicted RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 CLLU1OSQ5K130 101 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 GPR139Q6DWJ6 353 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 TMED8Q6PL24 325 aaPredicted RBP1.12□□□□□ -2.23
SMG1-212ENST00000566328 BLOC1S2Q6QNY1 142 aa1.12□□□□□ -2.23
SMG1-212ENST00000566328 CENPQQ7L2Z9 268 aaPredicted RBP1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms