RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 PGS1Q32NB8 556 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 CROCCP2Q86T23 111 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 CDH24Q86UP0 819 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 OR56A1Q8NGH5 318 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 OR5AK3PQ8NH89 298 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 LRRC46Q96FV0 321 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 ZFP3Q96NJ6 502 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 BTBD2Q9BX70 525 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 GPATCH2Q9NW75 528 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 CRIM1Q9NZV1 1036 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 ZNF337Q9Y3M9 751 aa18.04■□□□□ 0.48
SHCBP1-203ENST00000564272 CCDC168Q8NDH2 2452 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 CFLARO15519 480 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 NDUFB5O43674 189 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 RCBTB2O95199 551 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 TGM6O95932 706 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 TBXA2RP21731 343 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 SOAT1P35610 550 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 KIR2DL3P43628 341 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 CLDN15P56746 228 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 BST1Q10588 318 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 STX3Q13277 289 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 SMU1Q2TAY7 513 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 LSM12Q3MHD2 195 aaKnown RBP18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 HHATQ5VTY9 493 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 CDC73Q6P1J9 531 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 CAMKMTQ7Z624 323 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 NATD1Q8N6N6 113 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 SFXN5Q8TD22 340 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 SMPDL3BQ92485 455 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 STACQ99469 402 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 PIGQQ9BRB3 760 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 SFXN3Q9BWM7 321 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 NUF2Q9BZD4 464 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 PIGUQ9H490 435 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 NEUROD4Q9HD90 331 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 DUSP22Q9NRW4 184 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 PNPOQ9NVS9 261 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 GIN1Q9NXP7 522 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 JKAMPQ9P055 326 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 HAO1Q9UJM8 370 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 ITGB1BP2Q9UKP3 347 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 VDAC3Q9Y277 283 aa18.03■□□□□ 0.48
SHCBP1-203ENST00000564272 ANKRD17O75179 2603 aaKnown RBP18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 SNUPNO95149 360 aaKnown RBP18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 RNF144AP50876 292 aaPredicted RBP18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 SUCLG1P53597 346 aaKnown RBP18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 WDR4P57081 412 aaKnown RBP18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 HBA1P69905 142 aa18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 CD226Q15762 336 aa18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 OR4F3Q6IEY1 312 aa18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 CHMP1BQ7LBR1 199 aa18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 P4HA3Q7Z4N8 544 aa18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 CLECL1Q8IZS7 167 aa18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 MEIOBQ8N635 442 aa18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 SH3YL1Q96HL8 342 aaPredicted RBP18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 NPAS1Q99742 590 aa18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 KLHDC3Q9BQ90 382 aa18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 ACTRT3Q9BYD9 372 aa18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 UBQLN4Q9NRR5 601 aa18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 FAF1Q9UNN5 650 aaPredicted RBP18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 KCNE3Q9Y6H6 103 aa18.02■□□□□ 0.48
SHCBP1-203ENST00000564272 NPIPA5A0A0B4J1W7 369 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 TMEM120BA0PK00 339 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 SLC22A20A6NK97 555 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 NPIPA7E9PJI5 369 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 SCDO00767 359 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 NPIPA8P0DM63 369 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 HPGDP15428 266 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 LCN1P31025 176 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 CLDN20P56880 219 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 RPS26P62854 115 aaKnown RBP18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 TMEM44Q2T9K0 475 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 GLYR1Q49A26 553 aaPredicted RBP18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 DCST2Q5T1A1 773 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 LUZP2Q86TE4 346 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 CLEC4FQ8N1N0 589 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 GOT1L1Q8NHS2 421 aaPredicted RBP18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 MGARPQ8TDB4 240 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 ADAMTS15Q8TE58 950 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 FIG4Q92562 907 aa18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 FOXD3Q9UJU5 478 aaPredicted RBP18.01■□□□□ 0.47
SHCBP1-203ENST00000564272 A0A1W2PNV4 684 aa18■□□□□ 0.47
SHCBP1-203ENST00000564272 PEX19P40855 299 aa18■□□□□ 0.47
SHCBP1-203ENST00000564272 FLYWCH1Q4VC44 716 aa18■□□□□ 0.47
SHCBP1-203ENST00000564272 OR5D16Q8NGK9 328 aa18■□□□□ 0.47
SHCBP1-203ENST00000564272 NRGNQ92686 78 aa18■□□□□ 0.47
SHCBP1-203ENST00000564272 MOAP1Q96BY2 351 aa18■□□□□ 0.47
SHCBP1-203ENST00000564272 ZNF845Q96IR2 970 aaPredicted RBP18■□□□□ 0.47
SHCBP1-203ENST00000564272 OR7D2Q96RA2 312 aa18■□□□□ 0.47
SHCBP1-203ENST00000564272 PINK1Q9BXM7 581 aa18■□□□□ 0.47
SHCBP1-203ENST00000564272 DPY30Q9C005 99 aa18■□□□□ 0.47
SHCBP1-203ENST00000564272 ACBD3Q9H3P7 528 aa18■□□□□ 0.47
SHCBP1-203ENST00000564272 SERHL2Q9H4I8 314 aa18■□□□□ 0.47
SHCBP1-203ENST00000564272 MEAF6Q9HAF1 191 aa18■□□□□ 0.47
SHCBP1-203ENST00000564272 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 LINC01387J3KSC0 135 aa17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 TNFSF13O75888 250 aa17.99■□□□□ 0.47
SHCBP1-203ENST00000564272 KRT16P08779 473 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms