RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 DYNLRB1Q9NP97 96 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 OXSMQ9NWU1 459 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 RIMKLBQ9ULI2 386 aa9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.04□□□□□ -0.96
HDGFL3-204ENST00000563790 ZNF816-ZNF321PA0A0X1KG74 233 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 TMEM129A0AVI4 362 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 CXCL13O43927 109 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 UGT2B11O75310 529 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 GUCA1CO95843 209 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 HPXP02790 462 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 MELTFP08582 738 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 ADRA2AP08913 450 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 CDH2P19022 906 aaPredicted RBP9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 SAT1P21673 171 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 GRK2P25098 689 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 HOXD3P31249 432 aaPredicted RBP9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 PLIN5Q00G26 463 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 ZNF267Q14586 743 aaPredicted RBP9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 KCNJ11Q14654 390 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 ODF2Q5BJF6 829 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 TSTD2Q5T7W7 516 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 VSTM4Q8IW00 320 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 RNF10Q8N5U6 811 aaKnown RBP9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 FAM71DQ8N9W8 422 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 SLC16A11Q8NCK7 471 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 OR52E2Q8NGJ4 325 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 OR52K1Q8NGK4 314 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 SLC35B2Q8TB61 432 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 DOK4Q8TEW6 326 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 CCDC42Q96M95 316 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 PPP1R2P1Q96PQ5 205 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 TBCDQ9BTW9 1192 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 SPNS1Q9H2V7 528 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 MMP26Q9NRE1 261 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 LSM4Q9Y4Z0 139 aaKnown RBP9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 TANC2Q9HCD6 1990 aa9.03□□□□□ -0.96
HDGFL3-204ENST00000563790 FAT2Q9NYQ8 4349 aa9.02□□□□□ -0.96
HDGFL3-204ENST00000563790 IGHV3OR16-10A0A075B7F0 116 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 A0A088AWK7 358 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 ADAMDEC1O15204 470 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 FGF17O60258 216 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 SASH3O75995 380 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 YES1P07947 543 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 ZNF10P21506 573 aaPredicted RBP9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 PPARGP37231 505 aaPredicted RBP9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 MMP16P51512 607 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 STXBP1P61764 594 aaKnown RBP9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 TBX2Q13207 712 aaPredicted RBP9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 BIKQ13323 160 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 KLHL38Q2WGJ6 581 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 NSUN5P1Q3KNT7 163 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 DARS2Q6PI48 645 aaKnown RBP9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 AFTPHQ6ULP2 937 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 FADS6Q8N9I5 356 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 LRRC57Q8N9N7 239 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 OR4K17Q8NGC6 315 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 SSMEM1Q8WWF3 244 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 LINC00476Q8WZB0 136 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 FAM71F1Q96KD3 344 aaPredicted RBP9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 BIRC8Q96P09 236 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 MRI1Q9BV20 369 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 STOML1Q9UBI4 398 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 KIAA2026Q5HYC2 2103 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 VPS13DQ5THJ4 4388 aa9.02□□□□□ -0.97
HDGFL3-204ENST00000563790 TCRBV7S2A1N4TA0A589 114 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 SH3PXD2BA1X283 911 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 ERI3O43414 337 aaKnown RBP9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 KERAO60938 352 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 DUS4LO95620 317 aaKnown RBP9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 PPIAL4GP0DN37 164 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 NPPBP16860 134 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 ZNF12P17014 697 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 CTNNA2P26232 953 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 CTSL3PQ5NE16 218 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 VHLLQ6RSH7 139 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 HOMEZQ8IX15 550 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 CDK20Q8IZL9 346 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 LYG1Q8N1E2 194 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 OR4L1Q8NH43 312 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 ISOC1Q96CN7 298 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 RCC1LQ96I51 464 aaKnown RBP9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 TREX1Q9NSU2 369 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 GALPQ9UBC7 116 aa9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 LEF1Q9UJU2 399 aaPredicted RBP9.01□□□□□ -0.97
HDGFL3-204ENST00000563790 CIB4A0PJX0 185 aa9□□□□□ -0.97
HDGFL3-204ENST00000563790 MACROD2A1Z1Q3 448 aa9□□□□□ -0.97
HDGFL3-204ENST00000563790 POC1B-GALNT4F8VUJ3 575 aa9□□□□□ -0.97
HDGFL3-204ENST00000563790 CBX7O95931 251 aa9□□□□□ -0.97
HDGFL3-204ENST00000563790 F7P08709 466 aaPredicted RBP9□□□□□ -0.97
HDGFL3-204ENST00000563790 RPS3P23396 243 aaKnown RBP eCLIP9□□□□□ -0.97
HDGFL3-204ENST00000563790 CCND1P24385 295 aa9□□□□□ -0.97
HDGFL3-204ENST00000563790 EDNRAP25101 427 aa9□□□□□ -0.97
HDGFL3-204ENST00000563790 CERS1P27544 350 aa9□□□□□ -0.97
HDGFL3-204ENST00000563790 CHATP28329 748 aa9□□□□□ -0.97
HDGFL3-204ENST00000563790 HNRNPH1P31943 449 aaKnown RBP9□□□□□ -0.97
HDGFL3-204ENST00000563790 GAS1P54826 345 aa9□□□□□ -0.97
HDGFL3-204ENST00000563790 SLC35A2P78381 396 aa9□□□□□ -0.97
HDGFL3-204ENST00000563790 MVKQ03426 396 aa9□□□□□ -0.97
HDGFL3-204ENST00000563790 BST1Q10588 318 aa9□□□□□ -0.97
HDGFL3-204ENST00000563790 CDH17Q12864 832 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms