RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SEC14L5O43304 696 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 NDUFB5O43674 189 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 ITM2AO43736 263 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 TNFRSF21O75509 655 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 SKAP2O75563 359 aaPredicted RBP9.27□□□□□ -0.93
CLK3-205ENST00000561673 HMGN2P05204 90 aaKnown RBP9.27□□□□□ -0.93
CLK3-205ENST00000561673 NGFRP08138 427 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 ALOX5P09917 674 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 CD1EP15812 388 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 DDX5P17844 614 aaKnown RBP9.27□□□□□ -0.93
CLK3-205ENST00000561673 KIR2DL2P43627 348 aaPredicted RBP9.27□□□□□ -0.93
CLK3-205ENST00000561673 CPA2P48052 419 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 DIO3P55073 304 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 EEFSECP57772 596 aaKnown RBP9.27□□□□□ -0.93
CLK3-205ENST00000561673 CCNJQ5T5M9 372 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 CPTPQ5TA50 214 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 NUDCD3Q8IVD9 361 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 MREGQ8N565 214 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 KRTCAP2Q8N6L1 136 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 GATSQ8NAP1 163 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 FNDC5Q8NAU1 212 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 PSMA8Q8TAA3 256 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 FIG4Q92562 907 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 COQ8BQ96D53 544 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 PKNOX2Q96KN3 472 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 PINK1Q9BXM7 581 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 PARD6BQ9BYG5 372 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 ZNF395Q9H8N7 513 aaPredicted RBP9.27□□□□□ -0.93
CLK3-205ENST00000561673 ZCCHC3Q9NUD5 404 aaKnown RBP9.27□□□□□ -0.93
CLK3-205ENST00000561673 ST6GALNAC2Q9UJ37 374 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 PACSIN3Q9UKS6 424 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 VDAC3Q9Y277 283 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 SNX8Q9Y5X2 465 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 AP4B1Q9Y6B7 739 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 F8P00451 2351 aa9.27□□□□□ -0.93
CLK3-205ENST00000561673 WDR91A4D1P6 747 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 CTIFO43310 598 aaKnown RBP9.26□□□□□ -0.93
CLK3-205ENST00000561673 LYPLA1O75608 230 aaPredicted RBP9.26□□□□□ -0.93
CLK3-205ENST00000561673 CRHP06850 196 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 HPGDP15428 266 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 PRPS1L1P21108 318 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 RPL3P39023 403 aaKnown RBP9.26□□□□□ -0.93
CLK3-205ENST00000561673 SERPINB4P48594 390 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 CCT3P49368 545 aaKnown RBP9.26□□□□□ -0.93
CLK3-205ENST00000561673 PRIM2P49643 509 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 ZNF844Q08AG5 666 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 FAM27E3Q08E93 113 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 LASP1Q14847 261 aaKnown RBP9.26□□□□□ -0.93
CLK3-205ENST00000561673 PON3Q15166 354 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 OR2A2Q6IF42 318 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 VWA1Q6PCB0 445 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 BTLAQ7Z6A9 289 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 GGNQ86UU5 652 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 RIMKLAQ8IXN7 391 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 METTL25Q8N6Q8 603 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 COX18Q8N8Q8 333 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 CNEP1R1Q8N9A8 125 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 FNDC9Q8TBE3 224 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 OR5P2Q8WZ92 322 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 SMPDL3BQ92485 455 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 JADE3Q92613 823 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 CDS1Q92903 461 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 NINJ1Q92982 152 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 TUBGCP3Q96CW5 907 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 ZNF845Q96IR2 970 aaPredicted RBP9.26□□□□□ -0.93
CLK3-205ENST00000561673 DACH2Q96NX9 599 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 STACQ99469 402 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 PRPF18Q99633 342 aaKnown RBP9.26□□□□□ -0.93
CLK3-205ENST00000561673 NPAS1Q99742 590 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 KLHDC3Q9BQ90 382 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 BTBD2Q9BX70 525 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 C20orf27Q9GZN8 174 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 CXorf36Q9H7Y0 433 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 RNF122Q9H9V4 155 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 UBQLN4Q9NRR5 601 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 DUSP22Q9NRW4 184 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 ATAD3AQ9NVI7 634 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 GPATCH2Q9NW75 528 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 GIN1Q9NXP7 522 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 PLEKHA6Q9Y2H5 1048 aa9.26□□□□□ -0.93
CLK3-205ENST00000561673 NF1P21359 2839 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 DOCK7Q96N67 2140 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 ITPR3Q14573 2671 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 A0A087WZY1 265 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 SH3D21A4FU49 640 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 SCDO00767 359 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 MSTNO14793 375 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 RGS16O15492 202 aaPredicted RBP9.25□□□□□ -0.93
CLK3-205ENST00000561673 SMNDC1O75940 238 aaKnown RBP eCLIP9.25□□□□□ -0.93
CLK3-205ENST00000561673 AQP8O94778 261 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 HSPA4LO95757 839 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 C6orf47O95873 294 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 CGAP01215 116 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 OPN1LWP04000 364 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 G6PDP11413 515 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 LCN1P31025 176 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 CPOXP36551 454 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 POU6F2P78424 691 aaPredicted RBP9.25□□□□□ -0.93
CLK3-205ENST00000561673 OCRLQ01968 901 aa9.25□□□□□ -0.93
CLK3-205ENST00000561673 EMX2Q04743 252 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms