RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 CT45A8P0DMV1 189 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 CT45A9P0DMV2 189 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 EPXP11678 715 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 PPICP45877 212 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 TMED10P49755 219 aaKnown RBP15.13■□□□□ 0.01
NEK9-211ENST00000557673 LRRC74AQ0VAA2 488 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 ACSF3Q4G176 576 aaPredicted RBP15.13■□□□□ 0.01
NEK9-211ENST00000557673 CT45A2Q5DJT8 189 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 DESI1Q6ICB0 168 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 MFSD12Q6NUT3 480 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 SEM1Q6ZVN7 128 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 SPATA21Q7Z572 469 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 FUNDC1Q8IVP5 155 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 RELL2Q8NC24 303 aaPredicted RBP15.13■□□□□ 0.01
NEK9-211ENST00000557673 VPS37AQ8NEZ2 397 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 NUP43Q8NFH3 380 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 OR56A1Q8NGH5 318 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 OR5AK3PQ8NH89 298 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 MOAP1Q96BY2 351 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 ZNF597Q96LX8 424 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 LMF2Q9BU23 707 aaKnown RBP15.13■□□□□ 0.01
NEK9-211ENST00000557673 FAM107BQ9H098 131 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 SLC6A15Q9H2J7 730 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 GSX1Q9H4S2 264 aaPredicted RBP15.13■□□□□ 0.01
NEK9-211ENST00000557673 RABEP2Q9H5N1 569 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 SERHLQ9NQF3 203 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 CCDC167Q9P0B6 97 aa15.13■□□□□ 0.01
NEK9-211ENST00000557673 GPR55Q9Y2T6 319 aaPredicted RBP15.13■□□□□ 0.01
NEK9-211ENST00000557673 GMNCA6NCL1 334 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 TO15178 435 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 TRIM3O75382 744 aaPredicted RBP15.12■□□□□ 0.01
NEK9-211ENST00000557673 DRD5P21918 477 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 GDF1P27539 372 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 MAP3K8P41279 467 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 TRPC1P48995 793 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 PSPHP78330 225 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 PSG6Q00889 435 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 TP53BP2Q13625 1128 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 DEFB113Q30KQ7 82 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 SPDYE7PQ495Y7 208 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 AGKQ53H12 422 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 EXOSC6Q5RKV6 272 aaKnown RBP15.12■□□□□ 0.01
NEK9-211ENST00000557673 BLOC1S3Q6QNY0 202 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 DNAJC14Q6Y2X3 702 aaPredicted RBP15.12■□□□□ 0.01
NEK9-211ENST00000557673 TNIP2Q8NFZ5 429 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 VPS33AQ96AX1 596 aa15.12■□□□□ 0.01
NEK9-211ENST00000557673 PPM1BO75688 479 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 SNX4O95219 450 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 ACP2P11117 423 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 CASP3P42574 277 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 CDKN2CP42773 168 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 CCT3P49368 545 aaKnown RBP15.11■□□□□ 0.01
NEK9-211ENST00000557673 PRKAG1P54619 331 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 SORDQ00796 357 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 PLCXD2Q0VAA5 305 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 LASP1Q14847 261 aaKnown RBP15.11■□□□□ 0.01
NEK9-211ENST00000557673 ZNHIT3Q15649 155 aaPredicted RBP15.11■□□□□ 0.01
NEK9-211ENST00000557673 CDRT4Q8N9R6 151 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 FBXO30Q8TB52 745 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 OMA1Q96E52 524 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 SPDL1Q96EA4 605 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 PANX1Q96RD7 426 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 SECISBP2Q96T21 854 aaKnown RBP15.11■□□□□ 0.01
NEK9-211ENST00000557673 TIMP4Q99727 224 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 ELAC2Q9BQ52 826 aaKnown RBP15.11■□□□□ 0.01
NEK9-211ENST00000557673 INPP5KQ9BT40 448 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 ANGPTL4Q9BY76 406 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 SLC52A3Q9NQ40 469 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 MRGBPQ9NV56 204 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 GPATCH2Q9NW75 528 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 PCDHGB4Q9UN71 923 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 FREM3P0C091 2139 aa15.11■□□□□ 0.01
NEK9-211ENST00000557673 CCDC154A6NI56 674 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 TTC36A6NLP5 189 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 SNX3O60493 162 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 SHOX2O60902 331 aaPredicted RBP15.1■□□□□ 0.01
NEK9-211ENST00000557673 TRAPPC6AO75865 159 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 ATE1O95260 518 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 CPSF4O95639 269 aaKnown RBP15.1■□□□□ 0.01
NEK9-211ENST00000557673 HMGN2P05204 90 aaKnown RBP15.1■□□□□ 0.01
NEK9-211ENST00000557673 NAGAP17050 411 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 OPRM1P35372 400 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 MASP1P48740 699 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 PRIM2P49643 509 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 RPP38P78345 283 aaKnown RBP15.1■□□□□ 0.01
NEK9-211ENST00000557673 LTBQ06643 244 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 CRYZQ08257 329 aaKnown RBP15.1■□□□□ 0.01
NEK9-211ENST00000557673 FNDC7Q5VTL7 733 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 NSUN5P2Q63ZY6 315 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 BHLHB9Q6PI77 547 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 PACS2Q86VP3 889 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 SLC44A2Q8IWA5 706 aaPredicted RBP15.1■□□□□ 0.01
NEK9-211ENST00000557673 CLEC4FQ8N1N0 589 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 NAXEQ8NCW5 288 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 HGDQ93099 445 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 ITCHQ96J02 903 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 C18orf12Q96KH6 178 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 NODALQ96S42 347 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 NMUR2Q9GZQ4 415 aa15.1■□□□□ 0.01
NEK9-211ENST00000557673 PRDM14Q9GZV8 571 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms