RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 RBMXL3Q8N7X1 1067 aaKnown RBP8.39□□□□□ -1.07
SYNE3-205ENST00000557275 RADILQ96JH8 1075 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 FBXW11Q9UKB1 542 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 SCN2AQ99250 2005 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 DCCP43146 1447 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 NMBRP28336 390 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 ZNF133P52736 654 aaPredicted RBP8.39□□□□□ -1.07
SYNE3-205ENST00000557275 CXCR4P61073 352 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 SFRP5Q5T4F7 317 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 C1orf52Q8N6N3 182 aaKnown RBP8.39□□□□□ -1.07
SYNE3-205ENST00000557275 NDNFQ8TB73 568 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 ST7LQ8TDW4 575 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 SLC25A21Q9BQT8 299 aaPredicted RBP8.39□□□□□ -1.07
SYNE3-205ENST00000557275 MARCKSL1P49006 195 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 RAB13P51153 203 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 ADGRF3Q8IZF5 1079 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 OR7G3Q8NG95 312 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 OR56B1Q8NGI3 324 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 PIGVQ9NUD9 493 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 MAGI3Q5TCQ9 1506 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 WASH4PA8MWX3 477 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 DLX2Q07687 328 aaPredicted RBP8.39□□□□□ -1.07
SYNE3-205ENST00000557275 FAM156AQ8NDB6 213 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 SDSLQ96GA7 329 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 P2RY13Q9BPV8 354 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 TMEM225BP0DP42 221 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 PAX6P26367 422 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 LRRC73Q5JTD7 316 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 LINC00299Q6ZSB3 139 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 MRPL21Q7Z2W9 205 aaKnown RBP8.39□□□□□ -1.07
SYNE3-205ENST00000557275 KPTNQ9Y664 436 aa8.39□□□□□ -1.07
SYNE3-205ENST00000557275 FOXE1O00358 373 aaPredicted RBP8.38□□□□□ -1.07
SYNE3-205ENST00000557275 OR1D2P34982 312 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 CAP1Q01518 475 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 ENDOGQ14249 297 aaKnown RBP8.38□□□□□ -1.07
SYNE3-205ENST00000557275 CNIH2Q6PI25 160 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 CFAP77Q6ZQR2 320 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 NPLOC4Q8TAT6 608 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 METTL2AQ96IZ6 378 aaKnown RBP8.38□□□□□ -1.07
SYNE3-205ENST00000557275 THAP7Q9BT49 309 aaPredicted RBP8.38□□□□□ -1.07
SYNE3-205ENST00000557275 CD244Q9BZW8 370 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 OR8D2Q9GZM6 311 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 SLC15A5A6NIM6 579 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 KIAA1324LA8MWY0 1029 aaPredicted RBP8.38□□□□□ -1.07
SYNE3-205ENST00000557275 ZNF623O75123 536 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 ADAMTS4O75173 837 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 NTSR2O95665 410 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 GCH1P30793 250 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 HOXD11P31277 338 aaPredicted RBP8.38□□□□□ -1.07
SYNE3-205ENST00000557275 HNF1BP35680 557 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 SLX4IPQ5VYV7 408 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 TECTBQ96PL2 329 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 PTPN18Q99952 460 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 TLE6Q9H808 572 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 CHD5Q8TDI0 1954 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 ROBO2Q9HCK4 1378 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 TAS2R40P59535 323 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 SPCS2Q15005 226 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 FAM124AQ86V42 546 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 RAB7BQ96AH8 199 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 RPS17P08708 135 aaKnown RBP8.38□□□□□ -1.07
SYNE3-205ENST00000557275 TIGITQ495A1 244 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 REC114Q7Z4M0 266 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 KIAA0319LQ8IZA0 1049 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 OR9A1PQ8NGU1 263 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 PRAP1Q96NZ9 151 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 FAM173AQ9BQD7 235 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 MEGF6O75095 1541 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 HAS3O00219 553 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 AMTP48728 403 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 DNAJB11Q9UBS4 358 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 SARDHQ9UL12 918 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 PTTG1IPP53801 180 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 IQCJQ1A5X6 159 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 PXDC1Q5TGL8 231 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 GDPD4Q6W3E5 623 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 OR51L1Q8NGJ5 315 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 ARHGAP9Q9BRR9 750 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 FAM24AA6NFZ4 105 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 FAM163BP0C2L3 166 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 ADORA3P0DMS8 318 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 CPN1P15169 458 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 BTN1A1Q13410 526 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 YIF1BQ5BJH7 314 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 OR52E8Q6IFG1 317 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 APH1AQ96BI3 265 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 PKP2Q99959 881 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 PIGQQ9BRB3 760 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 KCNAB2Q13303 367 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 SGCAQ16586 387 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 UGCGQ16739 394 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 TATDN3Q17R31 274 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 PHF19Q5T6S3 580 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 BLOC1S3Q6QNY0 202 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 KDM8Q8N371 416 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 GIMAP1Q8WWP7 306 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 HMCESQ96FZ2 354 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 DISP1Q96F81 1524 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 PTPRUQ92729 1446 aa8.38□□□□□ -1.07
SYNE3-205ENST00000557275 ANKRD30BLA7E2S9 258 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms