RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 FIGNL1Q6PIW4 674 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 NATD1Q8N6N6 113 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 METTL25Q8N6Q8 603 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 COX18Q8N8Q8 333 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 FNDC5Q8NAU1 212 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 FIG4Q92562 907 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 STACQ99469 402 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 LIME1Q9H400 295 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 UBQLN4Q9NRR5 601 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 DUSP22Q9NRW4 184 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 ATAD3AQ9NVI7 634 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 GIN1Q9NXP7 522 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.6■□□□□ 0.41
ATF1-202ENST00000549612 AP4B1Q9Y6B7 739 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 V9GYY5 206 aaPredicted RBP17.6■□□□□ 0.41
ATF1-202ENST00000549612 MPDZO75970 2070 aa17.6■□□□□ 0.41
ATF1-202ENST00000549612 A0A087WZY1 265 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 SEC14L5O43304 696 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 HMGN2P05204 90 aaKnown RBP17.59■□□□□ 0.41
ATF1-202ENST00000549612 PCYT1AP49585 367 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 ZNF844Q08AG5 666 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 KRT71Q3SY84 523 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 IL23RQ5VWK5 629 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 RIMKLAQ8IXN7 391 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 OR5P2Q8WZ92 322 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 COQ8BQ96D53 544 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 STARD4Q96DR4 205 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 OTUB1Q96FW1 271 aaPredicted RBP17.59■□□□□ 0.41
ATF1-202ENST00000549612 DACH2Q96NX9 599 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 FOXC2Q99958 501 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 YIPF4Q9BSR8 244 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 BTBD2Q9BX70 525 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 PINK1Q9BXM7 581 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 CXXC4Q9H2H0 198 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 RNF122Q9H9V4 155 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 FBXO34Q9NWN3 711 aa17.59■□□□□ 0.41
ATF1-202ENST00000549612 MED13LQ71F56 2210 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 A0A1W2PQD3 144 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 C7orf72A4D263 438 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 PRPS1L1P21108 318 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 KIR2DL2P43627 348 aaPredicted RBP17.58■□□□□ 0.4
ATF1-202ENST00000549612 C21orf58P58505 322 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 POU6F2P78424 691 aaPredicted RBP17.58■□□□□ 0.4
ATF1-202ENST00000549612 LASP1Q14847 261 aaKnown RBP17.58■□□□□ 0.4
ATF1-202ENST00000549612 VWA1Q6PCB0 445 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 GGNQ86UU5 652 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 NUDCD3Q8IVD9 361 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 MISPQ8IVT2 679 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 GTPBP8Q8N3Z3 284 aaPredicted RBP17.58■□□□□ 0.4
ATF1-202ENST00000549612 OR56A1Q8NGH5 318 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 FNDC9Q8TBE3 224 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 ACTRT2Q8TDY3 377 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 JADE3Q92613 823 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 TUBGCP3Q96CW5 907 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 PKNOX2Q96KN3 472 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 ZIM3Q96PE6 472 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 PRPF18Q99633 342 aaKnown RBP17.58■□□□□ 0.4
ATF1-202ENST00000549612 PIGUQ9H490 435 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 CXorf36Q9H7Y0 433 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 SSU72Q9NP77 194 aaKnown RBP17.58■□□□□ 0.4
ATF1-202ENST00000549612 CCM2LQ9NUG4 571 aaPredicted RBP17.58■□□□□ 0.4
ATF1-202ENST00000549612 ASIC5Q9NY37 505 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 EDARQ9UNE0 448 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 VDAC3Q9Y277 283 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 SNX8Q9Y5X2 465 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 PCNX3Q9H6A9 2034 aa17.58■□□□□ 0.4
ATF1-202ENST00000549612 SH3D21A4FU49 640 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 SHISA8B8ZZ34 492 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 RGS16O15492 202 aaPredicted RBP17.57■□□□□ 0.4
ATF1-202ENST00000549612 CTIFO43310 598 aaKnown RBP17.57■□□□□ 0.4
ATF1-202ENST00000549612 GMFGO60234 142 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 CCT3P49368 545 aaKnown RBP17.57■□□□□ 0.4
ATF1-202ENST00000549612 RPS3AP61247 264 aaKnown RBP17.57■□□□□ 0.4
ATF1-202ENST00000549612 MAD2L1Q13257 205 aaPredicted RBP17.57■□□□□ 0.4
ATF1-202ENST00000549612 PON3Q15166 354 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 GUSBP1Q15486 140 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 LSM12Q3MHD2 195 aaKnown RBP17.57■□□□□ 0.4
ATF1-202ENST00000549612 CCNJQ5T5M9 372 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 CDC73Q6P1J9 531 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 KRTCAP2Q8N6L1 136 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 CNEP1R1Q8N9A8 125 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 GATSQ8NAP1 163 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 PPP1R14CQ8TAE6 165 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 SFXN5Q8TD22 340 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 NUDT8Q8WV74 236 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 SMPDL3BQ92485 455 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 CDS1Q92903 461 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 ZBTB8AQ96BR9 441 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 ZNF845Q96IR2 970 aaPredicted RBP17.57■□□□□ 0.4
ATF1-202ENST00000549612 ACTRT3Q9BYD9 372 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 PARD6BQ9BYG5 372 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 NEUROD4Q9HD90 331 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 GPATCH2Q9NW75 528 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 STOML1Q9UBI4 398 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 EIF3LQ9Y262 564 aaKnown RBP17.57■□□□□ 0.4
ATF1-202ENST00000549612 C2CD3Q4AC94 2353 aa17.57■□□□□ 0.4
ATF1-202ENST00000549612 SCDO00767 359 aa17.56■□□□□ 0.4
ATF1-202ENST00000549612 BIRC5O15392 142 aa17.56■□□□□ 0.4
ATF1-202ENST00000549612 SMNDC1O75940 238 aaKnown RBP eCLIP17.56■□□□□ 0.4
ATF1-202ENST00000549612 SOX30O94993 753 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms