RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZNF440Q8IYI8 595 aa14.55□□□□□ -0.08
TRAFD1-203ENST00000547063 ADGRG5Q8IZF4 528 aa14.55□□□□□ -0.08
TRAFD1-203ENST00000547063 AMER2Q8N7J2 671 aa14.55□□□□□ -0.08
TRAFD1-203ENST00000547063 CANT1Q8WVQ1 401 aa14.55□□□□□ -0.08
TRAFD1-203ENST00000547063 HGDQ93099 445 aa14.55□□□□□ -0.08
TRAFD1-203ENST00000547063 SEPHS2Q99611 448 aa14.55□□□□□ -0.08
TRAFD1-203ENST00000547063 SDHAF3Q9NRP4 125 aa14.55□□□□□ -0.08
TRAFD1-203ENST00000547063 KCNE5Q9UJ90 142 aa14.55□□□□□ -0.08
TRAFD1-203ENST00000547063 AURKCQ9UQB9 309 aa14.55□□□□□ -0.08
TRAFD1-203ENST00000547063 AP4S1Q9Y587 144 aa14.55□□□□□ -0.08
TRAFD1-203ENST00000547063 KCNMB2Q9Y691 235 aa14.55□□□□□ -0.08
TRAFD1-203ENST00000547063 ACACAQ13085 2346 aa14.55□□□□□ -0.08
TRAFD1-203ENST00000547063 EXPH5Q8NEV8 1989 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 APC2O95996 2303 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 NPIPA5A0A0B4J1W7 369 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 SERINC4A6NH21 518 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 NPIPA7E9PJI5 369 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 HNRNPRO43390 633 aaKnown RBP14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 OR6B1O95007 311 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 LGI1O95970 557 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 NPIPA8P0DM63 369 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 FCGR1AP12314 374 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 EVI2BP34910 448 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 HLCSP50747 726 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 TMPRSS3P57727 454 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 FBXW4P57775 412 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 EEF1A1P68104 462 aaKnown RBP14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 TLE3Q04726 772 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 MAPK14Q16539 360 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 TBCELQ5QJ74 424 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 B3GNTL1Q67FW5 361 aaPredicted RBP14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 IL20RBQ6UXL0 311 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 ZNF836Q6ZNA1 936 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 RTL4Q6ZR62 310 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 GRAMD2AQ8IUY3 354 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 BEST3Q8N1M1 668 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 PAPD5Q8NDF8 572 aaKnown RBP14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 APOBEC4Q8WW27 367 aaKnown RBP14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 UTP23Q9BRU9 249 aaKnown RBP14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 RNF32Q9H0A6 362 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 ARMC1Q9NVT9 282 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 GPR83Q9NYM4 423 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 CNIH4Q9P003 139 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 PRDM4Q9UKN5 801 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 SH3GLB1Q9Y371 365 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 V9GYQ6 96 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 CEP295Q9C0D2 2601 aa14.54□□□□□ -0.08
TRAFD1-203ENST00000547063 CDHR4A6H8M9 788 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 K7ENP7 123 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 GTPBP1O00178 669 aaKnown RBP14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 NDUFB5O43674 189 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 FADS1O60427 444 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 ZNF354AO60765 605 aaPredicted RBP14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 CSTAP01040 98 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 IFNW1P05000 195 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 FABP3P05413 133 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 ERFP50548 548 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 CCL11P51671 97 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 MFAP5Q13361 173 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 RIPK1Q13546 671 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 MRPL2Q5T653 305 aaKnown RBP14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 INO80CQ6PI98 192 aaPredicted RBP14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 VTCN1Q7Z7D3 282 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 CYP4Z2PQ8N1L4 340 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 POGLUT1Q8NBL1 392 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 GPR32P1Q8NGA4 272 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 OR5M3Q8NGP4 307 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 DCLRE1BQ9H816 532 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 METTL7AQ9H8H3 244 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 S100A14Q9HCY8 104 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 IL1RAPQ9NPH3 570 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 KLRF1Q9NZS2 232 aa14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 URB1O60287 2271 aaKnown RBP14.53□□□□□ -0.08
TRAFD1-203ENST00000547063 MED19A0JLT2 244 aaPredicted RBP14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 PRAMEF25A6NGN4 478 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 A6NL46 340 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 TMEM229AB2RXF0 380 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 MGRN1O60291 552 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 MAN1A2O60476 641 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 TPST1O60507 370 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 EIF4E2O60573 245 aaKnown RBP14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 CEACAM4O75871 244 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 DNAJB5O75953 348 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 UBL4AP11441 157 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 UQCRBP14927 111 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 IFNA8P32881 189 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 RGS8P57771 180 aaPredicted RBP14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 OC90Q02509 493 aaPredicted RBP14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 NRF1Q16656 503 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 SLC22A10Q63ZE4 541 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 SLC30A6Q6NXT4 461 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 ZNF550Q7Z398 422 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 PIWIL3Q7Z3Z3 882 aaKnown RBP14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 HMGN2P46Q86SG4 172 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 RANBP3LQ86VV4 465 aaPredicted RBP14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 CYP4Z1Q86W10 505 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 CARM1Q86X55 608 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 ZDHHC21Q8IVQ6 265 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 FAM86B1Q8N7N1 296 aa14.52□□□□□ -0.09
TRAFD1-203ENST00000547063 OR10G3Q8NGC4 313 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms