RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 CLK3P49761 638 aaKnown RBP8.77□□□□□ -1.01
YBX3-215ENST00000544504 ATP12AP54707 1039 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 FOXL2P58012 376 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 CHRNEQ04844 493 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 FUT5Q11128 374 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 KLRB1Q12918 225 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 CHAF1BQ13112 559 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 AIMP2Q13155 320 aaKnown RBP8.77□□□□□ -1.01
YBX3-215ENST00000544504 IL10RAQ13651 578 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 FLYWCH1Q4VC44 716 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 LIN52Q52LA3 116 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 IFI44LQ53G44 452 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 DHRS4L2Q6PKH6 230 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 OPN5Q6U736 354 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 NPSR1Q6W5P4 371 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 FRRS1Q6ZNA5 592 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 WDR53Q7Z5U6 358 aaPredicted RBP8.77□□□□□ -1.01
YBX3-215ENST00000544504 CMIPQ8IY22 773 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 ARMC10Q8N2F6 343 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 BCORP1Q8N888 145 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 ZNF321PQ8N8H1 164 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 TMEM102Q8N9M5 508 aaPredicted RBP8.77□□□□□ -1.01
YBX3-215ENST00000544504 CLEC1AQ8NC01 280 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 OR52P1PQ8NH57 321 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 GEMIN6Q8WXD5 167 aaKnown RBP8.77□□□□□ -1.01
YBX3-215ENST00000544504 DIO2Q92813 273 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 SLC35B4Q969S0 331 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 OTUB1Q96FW1 271 aaPredicted RBP8.77□□□□□ -1.01
YBX3-215ENST00000544504 S100A14Q9HCY8 104 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 UBQLN4Q9NRR5 601 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.77□□□□□ -1.01
YBX3-215ENST00000544504 ARMC1Q9NVT9 282 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 ABI3Q9P2A4 366 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 MYOTQ9UBF9 498 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 PRDM4Q9UKN5 801 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 AURKCQ9UQB9 309 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 DTX4Q9Y2E6 619 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 SLC9A8Q9Y2E8 581 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 YARS2Q9Y2Z4 477 aaKnown RBP8.77□□□□□ -1.01
YBX3-215ENST00000544504 AP4S1Q9Y587 144 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 NPFFR2Q9Y5X5 522 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 KCNE3Q9Y6H6 103 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 CELSR1Q9NYQ6 3014 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 CCDC88CQ9P219 2028 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 ADGRG4Q8IZF6 3080 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 PRAMEF27A3QJZ7 478 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 AGAP5A6NIR3 686 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 H3BNH8 94 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 SCDO00767 359 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 TP53I11O14683 189 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 PRKD3O94806 890 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 PABPC4LP0CB38 370 aaKnown RBP8.76□□□□□ -1.01
YBX3-215ENST00000544504 NID1P14543 1247 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 IL7RP16871 459 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 RPS4Y1P22090 263 aaKnown RBP8.76□□□□□ -1.01
YBX3-215ENST00000544504 ABCD3P28288 659 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 IFNA8P32881 189 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 RFX3P48380 749 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 KCNJ5P48544 419 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 ATP1A4Q13733 1029 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 GPR68Q15743 365 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 MAPK11Q15759 364 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 ZNF141Q15928 474 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 ZNF311Q5JNZ3 666 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 RPS26P11Q5JNZ5 115 aaPredicted RBP8.76□□□□□ -1.01
YBX3-215ENST00000544504 TBCELQ5QJ74 424 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 DCAF10Q5QP82 559 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 RNF220Q5VTB9 566 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 TYW3Q6IPR3 259 aaKnown RBP8.76□□□□□ -1.01
YBX3-215ENST00000544504 FIGNL1Q6PIW4 674 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 NUP54Q7Z3B4 507 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 RPS19BP1Q86WX3 136 aaKnown RBP8.76□□□□□ -1.01
YBX3-215ENST00000544504 GPALPP1Q8IXQ4 340 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 ADGRG5Q8IZF4 528 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 PAPD5Q8NDF8 572 aaKnown RBP8.76□□□□□ -1.01
YBX3-215ENST00000544504 NR4A3Q92570 626 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 TMBIM1Q969X1 311 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 TAMM41Q96BW9 452 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 TMCO6Q96DC7 493 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 OMA1Q96E52 524 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 SLC47A1Q96FL8 570 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 ABHD17AQ96GS6 310 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 TPD52L3Q96J77 140 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 HSH2DQ96JZ2 352 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 ZNF354BQ96LW1 612 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 RUBCNLQ9H714 662 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 ZNF223Q9UK11 482 aaPredicted RBP8.76□□□□□ -1.01
YBX3-215ENST00000544504 MKLN1Q9UL63 735 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 POLHQ9Y253 713 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 SLC35A3Q9Y2D2 325 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 NF1P21359 2839 aa8.76□□□□□ -1.01
YBX3-215ENST00000544504 ICE1Q9Y2F5 2266 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 A0A1W2PQD3 144 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 CDC14CA4D256 554 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 A8MUI8 341 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 NPIPB9F8W1W9 429 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 TSPAN2O60636 221 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 FCMRO60667 390 aa8.75□□□□□ -1.01
YBX3-215ENST00000544504 DEAF1O75398 565 aaPredicted RBP8.75□□□□□ -1.01
YBX3-215ENST00000544504 NME6O75414 186 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms