RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 IFT52Q9Y366 437 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 AP4S1Q9Y587 144 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 NPFFR2Q9Y5X5 522 aa13.02□□□□□ -0.33
CD4-208ENST00000538827 NINQ8N4C6 2090 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 AGAP5A6NIR3 686 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 TMEM200CA6NKL6 621 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 B8ZZF3 427 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 H3BNX3 289 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 M0R3H8 397 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 SCDO00767 359 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 TSPAN2O60636 221 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 ITGA10O75578 1167 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 PPM1BO75688 479 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 UGT2B17O75795 530 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 FABP3P05413 133 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 FESP07332 822 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 THBS1P07996 1170 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 RPS4Y1P22090 263 aaKnown RBP13.01□□□□□ -0.33
CD4-208ENST00000538827 PRKAR1BP31321 381 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 OR1E2P47887 323 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 KCNJ5P48544 419 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 TMED10P49755 219 aaKnown RBP13.01□□□□□ -0.33
CD4-208ENST00000538827 ATP12AP54707 1039 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 FBXW4P57775 412 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 MAPK14Q16539 360 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 GLIPR1L2Q4G1C9 344 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 IRAK1BP1Q5VVH5 260 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 DESI1Q6ICB0 168 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 DHRS4L2Q6PKH6 230 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 CARM1Q86X55 608 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 ZDHHC21Q8IVQ6 265 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 ZNF527Q8NB42 609 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 ASB15Q8WXK1 588 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 ZG16BQ96DA0 208 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 RASL10BQ96S79 203 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 SAP130Q9H0E3 1048 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 YY1AP1Q9H869 796 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 RNPEPL1Q9HAU8 725 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 ZBTB20Q9HC78 741 aaPredicted RBP13.01□□□□□ -0.33
CD4-208ENST00000538827 ATP13A2Q9NQ11 1180 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 CCM2LQ9NUG4 571 aaPredicted RBP13.01□□□□□ -0.33
CD4-208ENST00000538827 KLHL28Q9NXS3 571 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 ZNF232Q9UNY5 417 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 SH3GLB1Q9Y371 365 aa13.01□□□□□ -0.33
CD4-208ENST00000538827 CLDN24A6NM45 220 aa13□□□□□ -0.33
CD4-208ENST00000538827 FRS3O43559 492 aa13□□□□□ -0.33
CD4-208ENST00000538827 SCO2O43819 266 aa13□□□□□ -0.33
CD4-208ENST00000538827 MAN1A2O60476 641 aa13□□□□□ -0.33
CD4-208ENST00000538827 ZNF354AO60765 605 aaPredicted RBP13□□□□□ -0.33
CD4-208ENST00000538827 ABCB7O75027 752 aa13□□□□□ -0.33
CD4-208ENST00000538827 UGT2B11O75310 529 aa13□□□□□ -0.33
CD4-208ENST00000538827 OXSR1O95747 527 aaPredicted RBP13□□□□□ -0.33
CD4-208ENST00000538827 IFNW1P05000 195 aa13□□□□□ -0.33
CD4-208ENST00000538827 NID1P14543 1247 aa13□□□□□ -0.33
CD4-208ENST00000538827 ANPEPP15144 967 aa13□□□□□ -0.33
CD4-208ENST00000538827 SOX3P41225 446 aa13□□□□□ -0.33
CD4-208ENST00000538827 SSR4P51571 173 aa13□□□□□ -0.33
CD4-208ENST00000538827 RRADP55042 308 aa13□□□□□ -0.33
CD4-208ENST00000538827 RGS8P57771 180 aaPredicted RBP13□□□□□ -0.33
CD4-208ENST00000538827 KCNJ10P78508 379 aa13□□□□□ -0.33
CD4-208ENST00000538827 AIMP2Q13155 320 aaKnown RBP13□□□□□ -0.33
CD4-208ENST00000538827 EFR3AQ14156 821 aa13□□□□□ -0.33
CD4-208ENST00000538827 DUSP7Q16829 419 aa13□□□□□ -0.33
CD4-208ENST00000538827 MRPL2Q5T653 305 aaKnown RBP13□□□□□ -0.33
CD4-208ENST00000538827 B3GNTL1Q67FW5 361 aaPredicted RBP13□□□□□ -0.33
CD4-208ENST00000538827 PCSK4Q6UW60 755 aa13□□□□□ -0.33
CD4-208ENST00000538827 DEF8Q6ZN54 512 aa13□□□□□ -0.33
CD4-208ENST00000538827 RPS19BP1Q86WX3 136 aaKnown RBP13□□□□□ -0.33
CD4-208ENST00000538827 TMCO5AQ8N6Q1 288 aa13□□□□□ -0.33
CD4-208ENST00000538827 SNIP1Q8TAD8 396 aaKnown RBP13□□□□□ -0.33
CD4-208ENST00000538827 THAP4Q8WY91 577 aa13□□□□□ -0.33
CD4-208ENST00000538827 DUS3LQ96G46 650 aaKnown RBP13□□□□□ -0.33
CD4-208ENST00000538827 ZNF354BQ96LW1 612 aa13□□□□□ -0.33
CD4-208ENST00000538827 CHID1Q9BWS9 393 aa13□□□□□ -0.33
CD4-208ENST00000538827 HOXD1Q9GZZ0 328 aa13□□□□□ -0.33
CD4-208ENST00000538827 DCLRE1BQ9H816 532 aa13□□□□□ -0.33
CD4-208ENST00000538827 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13□□□□□ -0.33
CD4-208ENST00000538827 KCNE5Q9UJ90 142 aa13□□□□□ -0.33
CD4-208ENST00000538827 POLHQ9Y253 713 aa13□□□□□ -0.33
CD4-208ENST00000538827 SLC9A8Q9Y2E8 581 aa13□□□□□ -0.33
CD4-208ENST00000538827 DOCK10Q96BY6 2186 aa13□□□□□ -0.33
CD4-208ENST00000538827 CPAMD8Q8IZJ3 1885 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 ATMQ13315 3056 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 MGAQ8IWI9 3026 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 OR6C70A6NIJ9 312 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 HNRNPRO43390 633 aaKnown RBP12.99□□□□□ -0.33
CD4-208ENST00000538827 CYP7B1O75881 506 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 OR6B1O95007 311 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 DIRAS1O95057 198 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 SEMG1P04279 462 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 GUSBP08236 651 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 FCGR1AP12314 374 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 LCN1P31025 176 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 PNLIPRP2P54317 469 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 MLF1P58340 268 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 EEF1A1P68104 462 aaKnown RBP12.99□□□□□ -0.33
CD4-208ENST00000538827 VLDLRP98155 873 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 RIPK1Q13546 671 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 RAPSNQ13702 412 aa12.99□□□□□ -0.33
CD4-208ENST00000538827 FGFBP1Q14512 234 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms