RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ZNF280AP59817 542 aaPredicted RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 MAXP61244 160 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 DCDP81605 110 aaKnown RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 ARHGAP1Q07960 439 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 SREBF2Q12772 1141 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 ZNF155Q12901 538 aaPredicted RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 GPR17Q13304 367 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 PLD1Q13393 1074 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 SNTB2Q13425 540 aaKnown RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 KLF9Q13886 244 aaPredicted RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 PUM1Q14671 1186 aaKnown RBP eCLIP6.27□□□□□ -1.41
USP28-207ENST00000538475 ZMYND11Q15326 602 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 MAPK14Q16539 360 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 RNF212Q495C1 297 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 IGSF11Q5DX21 431 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 C10orf91Q5T1B1 145 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 FAM219BQ5XKK7 198 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 OLFML2AQ68BL7 652 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 IL31Q6EBC2 164 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 C1orf94Q6P1W5 598 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 GSG1LQ6UXU4 331 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 CEACAM20Q6UY09 585 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 GLDNQ6ZMI3 551 aaPredicted RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 DEF8Q6ZN54 512 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 TMUB2Q71RG4 321 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 TMPRSS7Q7RTY8 843 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 LHFPL3Q86UP9 236 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 GLCCI1Q86VQ1 547 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 GPC2Q8N158 579 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 NAGSQ8N159 534 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 KRT78Q8N1N4 520 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 THEM5Q8N1Q8 247 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 CBARPQ8N350 705 aaPredicted RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 C12orf45Q8N5I9 185 aaPredicted RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 ZNF527Q8NB42 609 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 FBXO15Q8NCQ5 510 aaPredicted RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 PXT1Q8NFP0 134 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 GNPDA2Q8TDQ7 276 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 RNF141Q8WVD5 230 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 SMIM4Q8WVI0 70 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 PNPLA2Q96AD5 504 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 ELMOD3Q96FG2 381 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 LRRC46Q96FV0 321 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 NARS2Q96I59 477 aaKnown RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 APOLD1Q96LR9 279 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 Q96M66 194 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 CAMK1GQ96NX5 476 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 IL4I1Q96RQ9 567 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 COPS8Q99627 209 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 SLC12A9Q9BXP2 914 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 OR51M1Q9H341 326 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 ANKRD19PQ9H560 264 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 WDR26Q9H7D7 661 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 METTL17Q9H7H0 456 aaPredicted RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 EVA1AQ9H8M9 152 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 A4GALTQ9NPC4 353 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 DNAJC11Q9NVH1 559 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 PPP1R14DQ9NXH3 145 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 COQ3Q9NZJ6 369 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 DNAJC27Q9NZQ0 273 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 SPATA2Q9UM82 520 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 PPIEQ9UNP9 301 aaKnown RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 SCML2Q9UQR0 700 aa6.27□□□□□ -1.41
USP28-207ENST00000538475 MDC1Q14676 2089 aaKnown RBP6.27□□□□□ -1.41
USP28-207ENST00000538475 PAPPA2Q9BXP8 1791 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 POLR2AP24928 1970 aaKnown RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 TRABD2BA6NFA1 517 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 MGAT4DA6NG13 374 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 PRR23D1E9PI22 279 aaPredicted RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 GTPBP1O00178 669 aaKnown RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 WWP2O00308 870 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 PGRMC2O15173 223 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 EEF1E1O43324 174 aaKnown RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 KDELR3O43731 214 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 TLX2O43763 284 aaPredicted RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 CREBL2O60519 120 aaPredicted RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 FZD7O75084 574 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 GPR32O75388 356 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 ATG12O94817 140 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 OAZ2O95190 189 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 SERPINA3P01011 423 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 APOC3P02656 99 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 FABP1P07148 127 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 IL3P08700 152 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 PRR23D2P0DMB1 279 aaPredicted RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 UQCRC2P22695 453 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 AKAP5P24588 427 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 TACR1P25103 407 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 ELAVL4P26378 380 aaKnown RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 GIFP27352 417 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 POU1F1P28069 291 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 THBS2P35442 1172 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 SPAM1P38567 509 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 SLC1A3P43003 542 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 AKR1D1P51857 326 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 HMGCS2P54868 508 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 MAZP56270 477 aaKnown RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 NRG3P56975 720 aa6.26□□□□□ -1.41
USP28-207ENST00000538475 VSX2P58304 361 aaPredicted RBP6.26□□□□□ -1.41
USP28-207ENST00000538475 ZP1P60852 638 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms