RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 LIASO43766 372 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 SCO2O43819 266 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 PRKRAO75569 313 aaKnown RBP8.05□□□□□ -1.12
USP28-205ENST00000537706 HAUS5O94927 633 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 TBX6O95947 436 aaPredicted RBP8.05□□□□□ -1.12
USP28-205ENST00000537706 TFP02787 698 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 PCNAP12004 261 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 DAOP14920 347 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 ANPEPP15144 967 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 IVDP26440 423 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 CDK16Q00536 496 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 SPOCK1Q08629 439 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 PPP1R3AQ16821 1122 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 ARL13AQ5H913 290 aaPredicted RBP8.05□□□□□ -1.12
USP28-205ENST00000537706 ESPNLQ6ZVH7 1005 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 LARP4Q71RC2 724 aaKnown RBP eCLIP8.05□□□□□ -1.12
USP28-205ENST00000537706 CROCCP2Q86T23 111 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 GGNQ86UU5 652 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 ANKS4BQ8N8V4 417 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 OR4K14Q8NGD5 310 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 FAM110BQ8TC76 370 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 WDR60Q8WVS4 1066 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 RASSF4Q9H2L5 321 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 CNOT10Q9H9A5 744 aaKnown RBP8.05□□□□□ -1.12
USP28-205ENST00000537706 HHATLQ9HCP6 504 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 ESM1Q9NQ30 184 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 C20orf96Q9NUD7 363 aaPredicted RBP8.05□□□□□ -1.12
USP28-205ENST00000537706 MED11Q9P086 117 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 WNK1Q9H4A3 2382 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 ALPK2Q86TB3 2170 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 NBEAL2Q6ZNJ1 2754 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 TENM1Q9UKZ4 2725 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 CIB4A0PJX0 185 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 GLOD5A6NK44 160 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 TP73O15350 636 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 KNG1P01042 644 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 TGFB1P01137 390 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 CT62P0C5K7 136 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 KHKP50053 298 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 IDH3GP51553 393 aaPredicted RBP8.05□□□□□ -1.12
USP28-205ENST00000537706 PHEXP78562 749 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 IFFO1Q0D2I5 559 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 KCTD19Q17RG1 926 aaPredicted RBP8.05□□□□□ -1.12
USP28-205ENST00000537706 SWI5Q1ZZU3 235 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 KRT71Q3SY84 523 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 SH2D4BQ5SQS7 431 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 KHDRBS2Q5VWX1 349 aaKnown RBP8.05□□□□□ -1.12
USP28-205ENST00000537706 TRMT10CQ7L0Y3 403 aaKnown RBP8.05□□□□□ -1.12
USP28-205ENST00000537706 NUFIP2Q7Z417 695 aaKnown RBP8.05□□□□□ -1.12
USP28-205ENST00000537706 ARFGAP2Q8N6H7 521 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 C1GALT1C1Q96EU7 318 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 KCNS3Q9BQ31 491 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 LPAR2Q9HBW0 351 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 TAS2R16Q9NYV7 291 aa8.05□□□□□ -1.12
USP28-205ENST00000537706 ZNF490Q9ULM2 529 aaPredicted RBP8.05□□□□□ -1.12
USP28-205ENST00000537706 VSTM5A8MXK1 200 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 B9A039 149 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 SAP18O00422 153 aaKnown RBP8.04□□□□□ -1.12
USP28-205ENST00000537706 RIPK2O43353 540 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 SH3BGRLO75368 114 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 PDE5AO76074 875 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 PRKD3O94806 890 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 YES1P07947 543 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 F7P08709 466 aaPredicted RBP8.04□□□□□ -1.12
USP28-205ENST00000537706 ZNF17P17021 662 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 PGCP20142 388 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 PRTN3P24158 256 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 PPOXP50336 477 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 ARFIP1P53367 373 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 PNLIPRP2P54317 469 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 CARD18P57730 90 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 CHRNEQ04844 493 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 MAP4K2Q12851 820 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 OASLQ15646 514 aaKnown RBP8.04□□□□□ -1.12
USP28-205ENST00000537706 ZSCAN26Q16670 478 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 TUSC5Q8IXB3 177 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 TCAIMQ8N3R3 496 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 OR52N5Q8NH56 324 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 ZNF473Q8WTR7 871 aaKnown RBP8.04□□□□□ -1.12
USP28-205ENST00000537706 OSTF1Q92882 214 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 CPNE4Q96A23 557 aaPredicted RBP8.04□□□□□ -1.12
USP28-205ENST00000537706 GPA33Q99795 319 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 TMEM109Q9BVC6 243 aa8.04□□□□□ -1.12
USP28-205ENST00000537706 PRKDCP78527 4128 aaKnown RBP8.04□□□□□ -1.12
USP28-205ENST00000537706 LOC105371242A0A075B767 164 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 TNFSF11O14788 317 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 EIF3HO15372 352 aaKnown RBP eCLIP8.03□□□□□ -1.12
USP28-205ENST00000537706 PHGDHO43175 533 aaKnown RBP8.03□□□□□ -1.12
USP28-205ENST00000537706 BCAS2O75934 225 aaPredicted RBP8.03□□□□□ -1.12
USP28-205ENST00000537706 PGM3O95394 542 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 PORP16435 677 aaPredicted RBP8.03□□□□□ -1.12
USP28-205ENST00000537706 EVI2BP34910 448 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 XKP51811 444 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 GAS1P54826 345 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 IRF8Q02556 426 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 STX5Q13190 355 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 MED27Q6P2C8 311 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 BRICD5Q6PL45 260 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 RELL1Q8IUW5 271 aa8.03□□□□□ -1.12
USP28-205ENST00000537706 ZNF786Q8N393 782 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms