RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 NUP107P57740 925 aa21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 ISL1P61371 349 aa21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 ESRRGP62508 458 aa21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 IL5RAQ01344 420 aa21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 APOFQ13790 326 aa21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 EBPQ15125 230 aaKnown RBP21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 FAAH2Q6GMR7 532 aa21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 PGBD2Q6P3X8 592 aa21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 OR4K5Q8NGD3 323 aa21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 HDAC2Q92769 488 aaKnown RBP21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 ADIPOR1Q96A54 375 aa21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 SLC41A3Q96GZ6 507 aa21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 NXF5Q9H1B4 397 aaKnown RBP21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 WDR54Q9H977 334 aa21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 SEMA4GQ9NTN9 838 aa21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 GPN3Q9UHW5 284 aaPredicted RBP21.98■■□□□ 1.11
PTPMT1-205ENST00000534775 CBFA2T3O75081 653 aa21.97■■□□□ 1.11
PTPMT1-205ENST00000534775 IL33O95760 270 aa21.97■■□□□ 1.11
PTPMT1-205ENST00000534775 LCN1P31025 176 aa21.97■■□□□ 1.11
PTPMT1-205ENST00000534775 PSPHP78330 225 aa21.97■■□□□ 1.11
PTPMT1-205ENST00000534775 HOXC5Q00444 222 aa21.97■■□□□ 1.11
PTPMT1-205ENST00000534775 CD47Q08722 323 aa21.97■■□□□ 1.11
PTPMT1-205ENST00000534775 TOP3AQ13472 1001 aaPredicted RBP21.97■■□□□ 1.11
PTPMT1-205ENST00000534775 FGFBP1Q14512 234 aa21.97■■□□□ 1.11
PTPMT1-205ENST00000534775 ZSCAN1Q8NBB4 408 aa21.97■■□□□ 1.11
PTPMT1-205ENST00000534775 PRR14Q9BWN1 585 aa21.97■■□□□ 1.11
PTPMT1-205ENST00000534775 COL25A1Q9BXS0 654 aaPredicted RBP21.97■■□□□ 1.11
PTPMT1-205ENST00000534775 DPPA5A6NC42 116 aa21.96■■□□□ 1.11
PTPMT1-205ENST00000534775 TARDBPQ13148 414 aaKnown RBP eCLIP21.96■■□□□ 1.11
PTPMT1-205ENST00000534775 MRPL14Q6P1L8 145 aaKnown RBP21.96■■□□□ 1.11
PTPMT1-205ENST00000534775 KLHL17Q6TDP4 642 aa21.96■■□□□ 1.11
PTPMT1-205ENST00000534775 RRM2BQ7LG56 351 aa21.96■■□□□ 1.11
PTPMT1-205ENST00000534775 ZNF527Q8NB42 609 aa21.96■■□□□ 1.11
PTPMT1-205ENST00000534775 FBLIM1Q8WUP2 373 aa21.96■■□□□ 1.11
PTPMT1-205ENST00000534775 GAL3ST4Q96RP7 486 aa21.96■■□□□ 1.11
PTPMT1-205ENST00000534775 ZNF559Q9BR84 538 aa21.96■■□□□ 1.11
PTPMT1-205ENST00000534775 TUBA8Q9NY65 449 aaPredicted RBP21.96■■□□□ 1.11
PTPMT1-205ENST00000534775 C19orf25Q9UFG5 118 aaPredicted RBP21.96■■□□□ 1.11
PTPMT1-205ENST00000534775 A0A087WXM4 84 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 TRAPPC13A5PLN9 417 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 TRIM64A6NGJ6 449 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 SAGE2PA6NJ88 616 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 RFPL3O75679 317 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 ELK4P28324 431 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 SLC5A2P31639 672 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 RAB15P59190 212 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 TUBA4AP68366 448 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 SPEM2Q0P670 501 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 COX10Q12887 443 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 C6orf141Q5SZD1 244 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 GDF7Q7Z4P5 450 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 C9orf40Q8IXQ3 194 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 C17orf47Q8NEP4 570 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 SPSB2Q99619 263 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 CRB3Q9BUF7 120 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 ULBP3Q9BZM4 244 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 WWTR1Q9GZV5 400 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 BLOC1S6Q9UL45 172 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 TO15178 435 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 GDF9O60383 454 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 OSMP13725 252 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 ATP6V1B1P15313 513 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 ZNF28P17035 718 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 EPHA2P29317 976 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 GGT2P36268 569 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 MEP1AQ16819 746 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 C1orf94Q6P1W5 598 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 CD300LDQ6UXZ3 194 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 ZNF730Q6ZMV8 503 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 ZNF550Q7Z398 422 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 B3GNT7Q8NFL0 401 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 ACOT11Q8WXI4 607 aaPredicted RBP21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 HSPBAP1Q96EW2 488 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 UBQLN4Q9NRR5 601 aa21.95■■□□□ 1.1
PTPMT1-205ENST00000534775 A0A087WUU8 490 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 C9J4A7 227 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 GKN3PP0CG01 181 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 GSTM3P21266 225 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 KRT20P35900 424 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 RPL5P46777 297 aaKnown RBP21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 CRISP1P54107 249 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 CTU2Q2VPK5 515 aaKnown RBP21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 CCDC157Q569K6 752 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 LCN10Q6JVE6 187 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 DEPDC4Q8N2C3 294 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 CNOT9Q92600 299 aaKnown RBP21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 EFHD2Q96C19 240 aaPredicted RBP21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 ADNPQ9H2P0 1102 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 TMEM27Q9HBJ8 222 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 KRCC1Q9NPI7 259 aaPredicted RBP21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 DNAJB12Q9NXW2 375 aaKnown RBP21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 SLC7A7Q9UM01 511 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 SLC35A3Q9Y2D2 325 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 NTNG1Q9Y2I2 539 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 LOXL2Q9Y4K0 774 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 PCDHGA6Q9Y5G7 932 aa21.94■■□□□ 1.1
PTPMT1-205ENST00000534775 SERINC4A6NH21 518 aa21.93■■□□□ 1.1
PTPMT1-205ENST00000534775 CNOT3O75175 753 aaKnown RBP21.93■■□□□ 1.1
PTPMT1-205ENST00000534775 PRG2P13727 222 aa21.93■■□□□ 1.1
PTPMT1-205ENST00000534775 HPGDP15428 266 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms