RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CTIFO43310 598 aaKnown RBP13.93□□□□□ -0.18
CPSF1-211ENST00000533492 LAMP1P11279 417 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 TBXA2RP21731 343 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 DNASE1P24855 282 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 SUCLG1P53597 346 aaKnown RBP13.93□□□□□ -0.18
CPSF1-211ENST00000533492 POU6F2P78424 691 aaPredicted RBP13.93□□□□□ -0.18
CPSF1-211ENST00000533492 LASP1Q14847 261 aaKnown RBP13.93□□□□□ -0.18
CPSF1-211ENST00000533492 PTGR1Q14914 329 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.93□□□□□ -0.18
CPSF1-211ENST00000533492 LSM12Q3MHD2 195 aaKnown RBP13.93□□□□□ -0.18
CPSF1-211ENST00000533492 SPDYE7PQ495Y7 208 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 GATSQ8NAP1 163 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 FAM110BQ8TC76 370 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 OR5P2Q8WZ92 322 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 FAM120BQ96EK7 910 aaKnown RBP13.93□□□□□ -0.18
CPSF1-211ENST00000533492 OTUB1Q96FW1 271 aaPredicted RBP13.93□□□□□ -0.18
CPSF1-211ENST00000533492 LIME1Q9H400 295 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 UBQLN4Q9NRR5 601 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 CCM2LQ9NUG4 571 aaPredicted RBP13.93□□□□□ -0.18
CPSF1-211ENST00000533492 NDRG3Q9UGV2 375 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 ST6GALNAC2Q9UJ37 374 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 HIVEP1P15822 2718 aa13.93□□□□□ -0.18
CPSF1-211ENST00000533492 AKAP9Q99996 3911 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 A0A087WZY1 265 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 WDR91A4D1P6 747 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 H0YC42 278 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 MSTNO14793 375 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 CFLARO15519 480 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 TYROBPO43914 113 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 TNFSF13O75888 250 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 HSPA4LO95757 839 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 HMGN2P05204 90 aaKnown RBP13.92□□□□□ -0.18
CPSF1-211ENST00000533492 NGFRP08138 427 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 PRPS1L1P21108 318 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 LCN1P31025 176 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 ARRB2P32121 409 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 CPOXP36551 454 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 CCT3P49368 545 aaKnown RBP13.92□□□□□ -0.18
CPSF1-211ENST00000533492 TPD52P55327 224 aaPredicted RBP13.92□□□□□ -0.18
CPSF1-211ENST00000533492 CLDN15P56746 228 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 CLDN20P56880 219 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 MAD2L1Q13257 205 aaPredicted RBP13.92□□□□□ -0.18
CPSF1-211ENST00000533492 PON3Q15166 354 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 CCNJQ5T5M9 372 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 PPP4R4Q6NUP7 873 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 MISPQ8IVT2 679 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 FIG4Q92562 907 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 STARD4Q96DR4 205 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 PGM2Q96G03 612 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 DACH2Q96NX9 599 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 STACQ99469 402 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 BTBD2Q9BX70 525 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 PRRG4Q9BZD6 226 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 SIRT3Q9NTG7 399 aaPredicted RBP13.92□□□□□ -0.18
CPSF1-211ENST00000533492 FAF1Q9UNN5 650 aaPredicted RBP13.92□□□□□ -0.18
CPSF1-211ENST00000533492 ZNF175Q9Y473 711 aa13.92□□□□□ -0.18
CPSF1-211ENST00000533492 NUP214P35658 2090 aaPredicted RBP13.92□□□□□ -0.18
CPSF1-211ENST00000533492 ABCA4P78363 2273 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 UQCRHLA0A096LP55 91 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 SH3D21A4FU49 640 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 SHISA8B8ZZ34 492 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 SOX30O94993 753 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 GOSR1O95249 250 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 KRT16P08779 473 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 ATP6V1C1P21283 382 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 ETV4P43268 484 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 ZNF41P51814 821 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-211ENST00000533492 SIRPAP78324 504 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 TP53BP2Q13625 1128 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 ZAR1Q86SH2 424 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 WDR75Q8IWA0 830 aaKnown RBP13.91□□□□□ -0.18
CPSF1-211ENST00000533492 MREGQ8N565 214 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 OR56A1Q8NGH5 318 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 FNDC9Q8TBE3 224 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 ADAMTS15Q8TE58 950 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 CDS1Q92903 461 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 COQ8BQ96D53 544 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 SH3YL1Q96HL8 342 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-211ENST00000533492 ZNF845Q96IR2 970 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-211ENST00000533492 PKNOX2Q96KN3 472 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 FOXC2Q99958 501 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 ACTRT3Q9BYD9 372 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 PARD6BQ9BYG5 372 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 CENPHQ9H3R5 247 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 PIGUQ9H490 435 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 DUSP22Q9NRW4 184 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 FBXO34Q9NWN3 711 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 PLEKHA6Q9Y2H5 1048 aa13.91□□□□□ -0.18
CPSF1-211ENST00000533492 EIF1AYO14602 144 aaKnown RBP13.9□□□□□ -0.18
CPSF1-211ENST00000533492 C6orf47O95873 294 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 ZNF17P17021 662 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 KIR2DL2P43627 348 aaPredicted RBP13.9□□□□□ -0.18
CPSF1-211ENST00000533492 EIF1AXP47813 144 aaKnown RBP13.9□□□□□ -0.18
CPSF1-211ENST00000533492 KCNJ5P48544 419 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 OCRLQ01968 901 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 FAM27E3Q08E93 113 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 FGFBP1Q14512 234 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 CHI3L2Q15782 390 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 TMEM44Q2T9K0 475 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms