RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 PPCDCQ96CD2 204 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 RASSF1Q9NS23 344 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 SIRT3Q9NTG7 399 aaPredicted RBP17.12■□□□□ 0.33
SSH3-209ENST00000532600 DNAJB12Q9NXW2 375 aaKnown RBP17.12■□□□□ 0.33
SSH3-209ENST00000532600 ANKRD28O15084 1053 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 MAPK1P28482 360 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 RFX3P48380 749 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 DGKQP52824 942 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 SUCLG1P53597 346 aaKnown RBP17.11■□□□□ 0.33
SSH3-209ENST00000532600 AQP5P55064 265 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 LSM12Q3MHD2 195 aaKnown RBP17.11■□□□□ 0.33
SSH3-209ENST00000532600 AAGABQ6PD74 315 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 SPNS3Q6ZMD2 512 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 RIMKLAQ8IXN7 391 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 LRRC34Q8IZ02 419 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 GCNT2Q8N0V5 402 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 FBXO30Q8TB52 745 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 FAM110BQ8TC76 370 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 INTS12Q96CB8 462 aaKnown RBP17.11■□□□□ 0.33
SSH3-209ENST00000532600 C1GALT1C1Q96EU7 318 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 RMND5BQ96G75 393 aaPredicted RBP17.11■□□□□ 0.33
SSH3-209ENST00000532600 C16orf58Q96GQ5 468 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 MARK4Q96L34 752 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 ZNF317Q96PQ6 595 aaPredicted RBP17.11■□□□□ 0.33
SSH3-209ENST00000532600 ACSS1Q9NUB1 689 aaPredicted RBP17.11■□□□□ 0.33
SSH3-209ENST00000532600 FGFR1OP2Q9NVK5 253 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 FBXO34Q9NWN3 711 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 NOP53Q9NZM5 478 aaKnown RBP17.11■□□□□ 0.33
SSH3-209ENST00000532600 SH3BP4Q9P0V3 963 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 EIF3LQ9Y262 564 aaKnown RBP17.11■□□□□ 0.33
SSH3-209ENST00000532600 ZNF337Q9Y3M9 751 aa17.11■□□□□ 0.33
SSH3-209ENST00000532600 MPDZO75970 2070 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 IGLV3-32A0A0A0MS00 114 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 A6NNC1 897 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 EEF1E1-BLOC1S5C9J1V9 151 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 EEF1E1O43324 174 aaKnown RBP17.1■□□□□ 0.33
SSH3-209ENST00000532600 TNFSF13O75888 250 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 HK1P19367 917 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 GPC1P35052 558 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 PRKAG1P54619 331 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 PRR5P85299 388 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 ZNHIT3Q15649 155 aaPredicted RBP17.1■□□□□ 0.33
SSH3-209ENST00000532600 BCL2A1Q16548 175 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 TMEM44Q2T9K0 475 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 NXNQ6DKJ4 435 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 SLC16A11Q8NCK7 471 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 NUP43Q8NFH3 380 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 OR7A2PQ8NGA2 310 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 OR4C3Q8NH37 302 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 LINC01560Q8TB33 94 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 GPR151Q8TDV0 419 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 FAM222BQ8WU58 562 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 OTUB1Q96FW1 271 aaPredicted RBP17.1■□□□□ 0.33
SSH3-209ENST00000532600 TEX37Q96LM6 180 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 TM9SF2Q99805 663 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 KLHDC3Q9BQ90 382 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 SFXN3Q9BWM7 321 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 NPHS2Q9NP85 383 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 AIG1Q9NVV5 245 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 ATP6V1HQ9UI12 483 aa17.1■□□□□ 0.33
SSH3-209ENST00000532600 FOXD3Q9UJU5 478 aaPredicted RBP17.1■□□□□ 0.33
SSH3-209ENST00000532600 OR2M5A3KFT3 312 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 TTC36A6NLP5 189 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 SHISA8B8ZZ34 492 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 SCAMP2O15127 329 aaKnown RBP17.09■□□□□ 0.33
SSH3-209ENST00000532600 TGDSO95455 350 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 ANGPTL1O95841 491 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 LAMP1P11279 417 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 ASMTP46597 345 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 MANFP55145 182 aaKnown RBP17.09■□□□□ 0.33
SSH3-209ENST00000532600 MAD2L1Q13257 205 aaPredicted RBP17.09■□□□□ 0.33
SSH3-209ENST00000532600 DAZAP2Q15038 168 aaPredicted RBP17.09■□□□□ 0.33
SSH3-209ENST00000532600 DUSP5Q16690 384 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 MFSD12Q6NUT3 480 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 CDRT4Q8N9R6 151 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 MTERF3Q96E29 417 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 ZBED6CLQ96FA7 236 aaPredicted RBP17.09■□□□□ 0.33
SSH3-209ENST00000532600 ZFP3Q96NJ6 502 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 NPAS1Q99742 590 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 POLDIP3Q9BY77 421 aaKnown RBP17.09■□□□□ 0.33
SSH3-209ENST00000532600 GPR45Q9Y5Y3 372 aa17.09■□□□□ 0.33
SSH3-209ENST00000532600 ITPR3Q14573 2671 aa17.08■□□□□ 0.33
SSH3-209ENST00000532600 MED13LQ71F56 2210 aa17.08■□□□□ 0.33
SSH3-209ENST00000532600 A0A1W2PNV4 684 aa17.08■□□□□ 0.32
SSH3-209ENST00000532600 KCNK2O95069 426 aa17.08■□□□□ 0.32
SSH3-209ENST00000532600 VIMP08670 466 aaKnown RBP17.08■□□□□ 0.32
SSH3-209ENST00000532600 PEX19P40855 299 aa17.08■□□□□ 0.32
SSH3-209ENST00000532600 IST1P53990 364 aa17.08■□□□□ 0.32
SSH3-209ENST00000532600 NME5P56597 212 aa17.08■□□□□ 0.32
SSH3-209ENST00000532600 CLDN8P56748 225 aa17.08■□□□□ 0.32
SSH3-209ENST00000532600 CLDN20P56880 219 aa17.08■□□□□ 0.32
SSH3-209ENST00000532600 C21orf58P58505 322 aa17.08■□□□□ 0.32
SSH3-209ENST00000532600 SF3A3Q12874 501 aaKnown RBP eCLIP17.08■□□□□ 0.32
SSH3-209ENST00000532600 GANABQ14697 944 aaKnown RBP17.08■□□□□ 0.32
SSH3-209ENST00000532600 RAET1LQ5VY80 246 aa17.08■□□□□ 0.32
SSH3-209ENST00000532600 SPATA19Q7Z5L4 167 aa17.08■□□□□ 0.32
SSH3-209ENST00000532600 LUZP2Q86TE4 346 aa17.08■□□□□ 0.32
SSH3-209ENST00000532600 GRAMD2AQ8IUY3 354 aa17.08■□□□□ 0.32
SSH3-209ENST00000532600 UBQLNLQ8IYU4 475 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms