RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 THAP1Q9NVV9 213 aa29.89■■■□□ 2.38
SSSCA1-205ENST00000527920 L3MBTL1Q9Y468 752 aa29.89■■■□□ 2.38
SSSCA1-205ENST00000527920 A0A1W2PQD3 144 aa29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 RNASET2O00584 256 aaKnown RBP29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 NDUFB5O43674 189 aa29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 SNNO75324 88 aaPredicted RBP29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 LBPP18428 481 aa29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 CAPN3P20807 821 aa29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 TP53BP2Q13625 1128 aa29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 ZAR1Q86SH2 424 aa29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 GALNT10Q86SR1 603 aa29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 CDS1Q92903 461 aa29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 TESCQ96BS2 214 aa29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 DPY30Q9C005 99 aa29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 ACBD3Q9H3P7 528 aa29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 TMBIM4Q9HC24 238 aa29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 PNPOQ9NVS9 261 aa29.88■■■□□ 2.37
SSSCA1-205ENST00000527920 ANKRD28O15084 1053 aa29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 CFLARO15519 480 aa29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 RCBTB2O95199 551 aa29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 HPGDP15428 266 aa29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 POU3F2P20265 443 aaPredicted RBP29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 DGKQP52824 942 aa29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 MAGOHP61326 146 aaKnown RBP29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 DPY19L1Q2PZI1 675 aa29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 TMEM44Q2T9K0 475 aa29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 PGS1Q32NB8 556 aa29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 ADAMTS15Q8TE58 950 aa29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 RNASE6Q93091 150 aaKnown RBP29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 OTUB1Q96FW1 271 aaPredicted RBP29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 SFXN3Q9BWM7 321 aa29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 FBXO34Q9NWN3 711 aa29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 NKIRAS1Q9NYS0 192 aa29.87■■■□□ 2.37
SSSCA1-205ENST00000527920 A0A087WZY1 265 aa29.86■■■□□ 2.37
SSSCA1-205ENST00000527920 OR2M5A3KFT3 312 aa29.86■■■□□ 2.37
SSSCA1-205ENST00000527920 ENO4A6NNW6 628 aa29.86■■■□□ 2.37
SSSCA1-205ENST00000527920 TMIGD3P0DMS9 266 aaPredicted RBP29.86■■■□□ 2.37
SSSCA1-205ENST00000527920 TCEA1P23193 301 aaKnown RBP29.86■■■□□ 2.37
SSSCA1-205ENST00000527920 EEFSECP57772 596 aaKnown RBP29.86■■■□□ 2.37
SSSCA1-205ENST00000527920 OR4F3Q6IEY1 312 aa29.86■■■□□ 2.37
SSSCA1-205ENST00000527920 ARSKQ6UWY0 536 aa29.86■■■□□ 2.37
SSSCA1-205ENST00000527920 MEIOBQ8N635 442 aa29.86■■■□□ 2.37
SSSCA1-205ENST00000527920 ACTRT2Q8TDY3 377 aa29.86■■■□□ 2.37
SSSCA1-205ENST00000527920 CHMP6Q96FZ7 201 aa29.86■■■□□ 2.37
SSSCA1-205ENST00000527920 KIAA1549Q9HCM3 1950 aa29.85■■■□□ 2.37
SSSCA1-205ENST00000527920 SCDO00767 359 aa29.85■■■□□ 2.37
SSSCA1-205ENST00000527920 CLNS1AP54105 237 aaKnown RBP29.85■■■□□ 2.37
SSSCA1-205ENST00000527920 EEF1A1P68104 462 aaKnown RBP29.85■■■□□ 2.37
SSSCA1-205ENST00000527920 OCRLQ01968 901 aa29.85■■■□□ 2.37
SSSCA1-205ENST00000527920 CCNJQ5T5M9 372 aa29.85■■■□□ 2.37
SSSCA1-205ENST00000527920 EEF1A1P5Q5VTE0 462 aa29.85■■■□□ 2.37
SSSCA1-205ENST00000527920 ATG16L1Q676U5 607 aa29.85■■■□□ 2.37
SSSCA1-205ENST00000527920 DOCK7Q96N67 2140 aa29.85■■■□□ 2.37
SSSCA1-205ENST00000527920 HOXD1Q9GZZ0 328 aa29.85■■■□□ 2.37
SSSCA1-205ENST00000527920 JKAMPQ9P055 326 aa29.85■■■□□ 2.37
SSSCA1-205ENST00000527920 ZNF337Q9Y3M9 751 aa29.85■■■□□ 2.37
SSSCA1-205ENST00000527920 AP4B1Q9Y6B7 739 aa29.85■■■□□ 2.37
SSSCA1-205ENST00000527920 ZNF17P17021 662 aa29.84■■■□□ 2.37
SSSCA1-205ENST00000527920 ATP6V1C1P21283 382 aa29.84■■■□□ 2.37
SSSCA1-205ENST00000527920 ANXA8L1Q5VT79 327 aa29.84■■■□□ 2.37
SSSCA1-205ENST00000527920 GRAMD2AQ8IUY3 354 aa29.84■■■□□ 2.37
SSSCA1-205ENST00000527920 ZNF527Q8NB42 609 aa29.84■■■□□ 2.37
SSSCA1-205ENST00000527920 ZNF559Q9BR84 538 aa29.84■■■□□ 2.37
SSSCA1-205ENST00000527920 TACC2O95359 2948 aa29.84■■■□□ 2.37
SSSCA1-205ENST00000527920 POLQO75417 2590 aa29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 C7orf72A4D263 438 aa29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 SLCO1B7G3V0H7 640 aa29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 SDHDO14521 159 aa29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 HDAC3O15379 428 aa29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 SCN2BO60939 215 aa29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 DCST2Q5T1A1 773 aa29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 CHMP1BQ7LBR1 199 aa29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 MTERF4Q7Z6M4 381 aaKnown RBP29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 LURAP1LQ8IV03 231 aa29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 CLECL1Q8IZS7 167 aa29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 VPS37AQ8NEZ2 397 aa29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 MGARPQ8TDB4 240 aa29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 PDZD2O15018 2839 aa29.83■■■□□ 2.37
SSSCA1-205ENST00000527920 PRSS51A0A1B0GVH4 220 aa29.82■■■□□ 2.36
SSSCA1-205ENST00000527920 DUXAA6NLW8 204 aa29.82■■■□□ 2.36
SSSCA1-205ENST00000527920 TRPC5OSA6NMA1 111 aa29.82■■■□□ 2.36
SSSCA1-205ENST00000527920 TNFRSF21O75509 655 aa29.82■■■□□ 2.36
SSSCA1-205ENST00000527920 UQCRC1P31930 480 aa29.82■■■□□ 2.36
SSSCA1-205ENST00000527920 SOAT1P35610 550 aa29.82■■■□□ 2.36
SSSCA1-205ENST00000527920 MYBPHQ13203 477 aa29.82■■■□□ 2.36
SSSCA1-205ENST00000527920 OR5AK3PQ8NH89 298 aa29.82■■■□□ 2.36
SSSCA1-205ENST00000527920 STOML1Q9UBI4 398 aa29.82■■■□□ 2.36
SSSCA1-205ENST00000527920 PCDHGB4Q9UN71 923 aa29.82■■■□□ 2.36
SSSCA1-205ENST00000527920 NUP214P35658 2090 aaPredicted RBP29.82■■■□□ 2.36
SSSCA1-205ENST00000527920 CSMD2Q7Z408 3487 aa29.81■■■□□ 2.36
SSSCA1-205ENST00000527920 CRHP06850 196 aa29.81■■■□□ 2.36
SSSCA1-205ENST00000527920 CLDN15P56746 228 aa29.81■■■□□ 2.36
SSSCA1-205ENST00000527920 CASP8Q14790 479 aa29.81■■■□□ 2.36
SSSCA1-205ENST00000527920 SPATA19Q7Z5L4 167 aa29.81■■■□□ 2.36
SSSCA1-205ENST00000527920 GTPBP8Q8N3Z3 284 aaPredicted RBP29.81■■■□□ 2.36
SSSCA1-205ENST00000527920 ZBTB8AQ96BR9 441 aa29.81■■■□□ 2.36
SSSCA1-205ENST00000527920 OR7D2Q96RA2 312 aa29.81■■■□□ 2.36
SSSCA1-205ENST00000527920 AIG1Q9NVV5 245 aa29.81■■■□□ 2.36
SSSCA1-205ENST00000527920 ZNF175Q9Y473 711 aa29.81■■■□□ 2.36
SSSCA1-205ENST00000527920 E9PBE3 544 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms