RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 MYO1GB0I1T2 1018 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 G3V3Y1 287 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 I3L1I5 382 aaPredicted RBP6.08□□□□□ -1.44
NEDD8-203ENST00000524927 IFNL4K9M1U5 179 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 NUDT17P0C025 328 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 TPBGLP0DKB5 382 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 TFPIP10646 304 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 ENO3P13929 434 aaPredicted RBP6.08□□□□□ -1.44
NEDD8-203ENST00000524927 MSH3P20585 1137 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 CDH5P33151 784 aaPredicted RBP6.08□□□□□ -1.44
NEDD8-203ENST00000524927 CDH6P55285 790 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 OR4D2P58180 307 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 MAT1AQ00266 395 aaKnown RBP6.08□□□□□ -1.44
NEDD8-203ENST00000524927 CUL4AQ13619 759 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 SRSF7Q16629 238 aaKnown RBP eCLIP6.08□□□□□ -1.44
NEDD8-203ENST00000524927 ZNF672Q499Z4 452 aaPredicted RBP6.08□□□□□ -1.44
NEDD8-203ENST00000524927 LRRC8EQ6NSJ5 796 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 SHQ1Q6PI26 577 aaKnown RBP6.08□□□□□ -1.44
NEDD8-203ENST00000524927 SCIMPQ6UWF3 145 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 KRBA2Q6ZNG9 492 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 RTL4Q6ZR62 310 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 ENOSF1Q7L5Y1 443 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 LRRC25Q8N386 305 aaPredicted RBP6.08□□□□□ -1.44
NEDD8-203ENST00000524927 TEX29Q8N6K0 151 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 TMEM35BQ8NCS4 154 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 RAB3IL1Q8TBN0 382 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 ASZ1Q8WWH4 475 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 RSRC1Q96IZ7 334 aaKnown RBP6.08□□□□□ -1.44
NEDD8-203ENST00000524927 CITED1Q99966 193 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 NTMT1Q9BV86 223 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 DRC3Q9H069 523 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 MAGEE1Q9HCI5 957 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 MSRB1Q9NZV6 116 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 FZD10Q9ULW2 581 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 ZNF711Q9Y462 761 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 KLK4Q9Y5K2 254 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 MMP24Q9Y5R2 645 aa6.08□□□□□ -1.44
NEDD8-203ENST00000524927 PLXNB1O43157 2135 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 A0A0J9YVX5 310 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 H0YIG0 161 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 P4HA2O15460 535 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 SEC14L5O43304 696 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 PDE5AO76074 875 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 CRHP06850 196 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 CYP11B1P15538 503 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 TBXA2RP21731 343 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 RYKP34925 604 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 DNASE1L1P49184 302 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 RPA4Q13156 261 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 ITGADQ13349 1161 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 FAM53BQ14153 422 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 CRYMQ14894 314 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 ABRAXAS2Q15018 415 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 TYSND1Q2T9J0 566 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 NHSL2Q5HYW2 709 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 CASC10Q5T4H9 136 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 AGAP6Q5VW22 663 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 ZNF449Q6P9G9 518 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 UGT2A3Q6UWM9 527 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 C17orf107Q6ZR85 190 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 DET1Q7L5Y6 550 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 TBC1D21Q8IYX1 336 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 TEX26Q8N6G2 289 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 OR5AR1Q8NGP9 310 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 SLC44A1Q8WWI5 657 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 WDFY2Q96P53 400 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 KRT12Q99456 494 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 CACNG6Q9BXT2 260 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 COG4Q9H9E3 785 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 SCPEP1Q9HB40 452 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 BPIFA1Q9NP55 256 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 NT5MQ9NPB1 228 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 SLC6A13Q9NSD5 602 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 ZNHIT6Q9NWK9 470 aaKnown RBP6.07□□□□□ -1.44
NEDD8-203ENST00000524927 SMOXQ9NWM0 555 aa6.07□□□□□ -1.44
NEDD8-203ENST00000524927 A0A1W2PNV4 684 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 BECN2A8MW95 431 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 NPIPB11E5RHQ5 1161 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 EEF2KO00418 725 aaKnown RBP6.06□□□□□ -1.44
NEDD8-203ENST00000524927 CLOCKO15516 846 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 PRPSAP2O60256 369 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 PAGE4O60829 102 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 MYZAPP0CAP1 466 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 EZRP15311 586 aaKnown RBP6.06□□□□□ -1.44
NEDD8-203ENST00000524927 ERCC2P18074 760 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 CDAP32320 146 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 PCK1P35558 622 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 XCR1P46094 333 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 SLCO1A2P46721 670 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 TRPC1P48995 793 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 PDLIM4P50479 330 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 EFNA4P52798 201 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 PRAMEP78395 509 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 ZNHIT3Q15649 155 aaPredicted RBP6.06□□□□□ -1.44
NEDD8-203ENST00000524927 ZDHHC20Q5W0Z9 365 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 ASPHD2Q6ICH7 369 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 LRRC8BQ6P9F7 803 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 GCNT2Q8N0V5 402 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 MSANTD4Q8NCY6 345 aa6.06□□□□□ -1.44
NEDD8-203ENST00000524927 ZNF540Q8NDQ6 660 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms