RNA–Protein interactions for RNA: ENST00000522665.5

NDRG1-223, Transcript of N-myc downstream regulated 1, human

TSL 2

Gene NDRG1, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDRG1-223	ENST00000522665	H3F3C	Q6NXT2	135 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	NUP54	Q7Z3B4	507 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	GRAMD2A	Q8IUY3	354 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	ZNF440	Q8IYI8	595 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	LILRA2	Q8N149	483 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	ZNF248	Q8NDW4	579 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	OR2T29	Q8NH02	315 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	OR4C3	Q8NH37	302 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	VANGL1	Q8TAA9	524 aa	Predicted RBP	13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	KCNE4	Q8WWG9	221 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	TTC9	Q92623	222 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	ZNF300	Q96RE9	604 aa	Predicted RBP	13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	RASL10B	Q96S79	203 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	PIP5K1A	Q99755	562 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	ATP13A2	Q9NQ11	1180 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	NDUFAF4	Q9P032	175 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665	TEKT2	Q9UIF3	430 aa		13.88	□□□□□ -0.19
NDRG1-223	ENST00000522665		M0R3H8	397 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	CASQ2	O14958	399 aa	Predicted RBP	13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	UGT2B11	O75310	529 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	EPPIN	O95925	133 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	RHCE	P18577	417 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	SPINK2	P20155	84 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	IFNA8	P32881	189 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	ADH7	P40394	386 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	ID4	P47928	161 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	SSR4	P51571	173 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	MLF1	P58340	268 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665		Q0VFX4	171 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	GK3P	Q14409	553 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	HMBOX1	Q6NT76	420 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	DEF8	Q6ZN54	512 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	C16orf47	Q6ZP98	133 aa	Predicted RBP	13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	AMIGO2	Q86SJ2	522 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	RPS19BP1	Q86WX3	136 aa	Known RBP	13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	CLIP4	Q8N3C7	705 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	CATSPER1	Q8NEC5	780 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	SPACA9	Q96E40	222 aa	Predicted RBP	13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	DPH1	Q9BZG8	443 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	TBL1XR1	Q9BZK7	514 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	AMBRA1	Q9C0C7	1298 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	POLR2J2	Q9GZM3	115 aa	Known RBP	13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	POLR2J3	Q9H1A7	115 aa	Known RBP	13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	CDCP1	Q9H5V8	836 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	HHATL	Q9HCP6	504 aa		13.87	□□□□□ -0.19
NDRG1-223	ENST00000522665	ALG1L2	C9J202	215 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	AP3D1	O14617	1153 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	TP53I11	O14683	189 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	PRSS23	O95084	383 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	CSTA	P01040	98 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	UBL4A	P11441	157 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	EVI2B	P34910	448 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	SMIM11A	P58511	58 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	NTRK2	Q16620	822 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	MEP1A	Q16819	746 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	IQCC	Q4KMZ1	466 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	LYPD8	Q6UX82	237 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	ZNF550	Q7Z398	422 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	COMTD1	Q86VU5	262 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	MISP	Q8IVT2	679 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	GPALPP1	Q8IXQ4	340 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	SVOPL	Q8N434	492 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	AMER2	Q8N7J2	671 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	POGLUT1	Q8NBL1	392 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	OR6T1	Q8NGN1	323 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	SNIP1	Q8TAD8	396 aa	Known RBP	13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	BRIX1	Q8TDN6	353 aa	Known RBP	13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	ASB15	Q8WXK1	588 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	HGD	Q93099	445 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	SDCCAG3	Q96C92	435 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	THOC3	Q96J01	351 aa	Known RBP	13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	PRRC1	Q96M27	445 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	LHPP	Q9H008	270 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	SEMA6A	Q9H2E6	1030 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	VCX	Q9H320	206 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	REEP1	Q9H902	201 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	EXOSC3	Q9NQT5	275 aa	Known RBP	13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	RLIM	Q9NVW2	624 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	DNAJB12	Q9NXW2	375 aa	Known RBP	13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	ABI3	Q9P2A4	366 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	TES	Q9UGI8	421 aa	Known RBP	13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	CHST2	Q9Y4C5	530 aa		13.86	□□□□□ -0.19
NDRG1-223	ENST00000522665	PRAMEF25	A6NGN4	478 aa		13.85	□□□□□ -0.19
NDRG1-223	ENST00000522665	CLDN24	A6NM45	220 aa		13.85	□□□□□ -0.19
NDRG1-223	ENST00000522665	GTPBP1	O00178	669 aa	Known RBP	13.85	□□□□□ -0.19
NDRG1-223	ENST00000522665	FMO6P	O60774	539 aa		13.85	□□□□□ -0.19
NDRG1-223	ENST00000522665	E2F6	O75461	281 aa		13.85	□□□□□ -0.19
NDRG1-223	ENST00000522665	PRKAR1A	P10644	381 aa		13.85	□□□□□ -0.19
NDRG1-223	ENST00000522665	ITGA3	P26006	1051 aa		13.85	□□□□□ -0.19
NDRG1-223	ENST00000522665	GCK	P35557	465 aa		13.85	□□□□□ -0.19
NDRG1-223	ENST00000522665	SOX3	P41225	446 aa		13.85	□□□□□ -0.19
NDRG1-223	ENST00000522665	PTDSS1	P48651	473 aa	Known RBP	13.85	□□□□□ -0.19
NDRG1-223	ENST00000522665	FBXW4	P57775	412 aa		13.85	□□□□□ -0.19
NDRG1-223	ENST00000522665	SPIB	Q01892	262 aa		13.85	□□□□□ -0.19
NDRG1-223	ENST00000522665	CDC20	Q12834	499 aa		13.85	□□□□□ -0.19
NDRG1-223	ENST00000522665	ZNF791	Q3KP31	576 aa	Predicted RBP	13.85	□□□□□ -0.19

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