RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 OR7D2Q96RA2 312 aa10.4□□□□□ -0.74
VCAN-212ENST00000515397 BTBD2Q9BX70 525 aa10.4□□□□□ -0.74
VCAN-212ENST00000515397 ACTRT3Q9BYD9 372 aa10.4□□□□□ -0.74
VCAN-212ENST00000515397 ENKD1Q9H0I2 346 aa10.4□□□□□ -0.74
VCAN-212ENST00000515397 PIGUQ9H490 435 aa10.4□□□□□ -0.74
VCAN-212ENST00000515397 ASIC5Q9NY37 505 aa10.4□□□□□ -0.74
VCAN-212ENST00000515397 ABCG2Q9UNQ0 655 aa10.4□□□□□ -0.74
VCAN-212ENST00000515397 AKAP6Q13023 2319 aa10.4□□□□□ -0.74
VCAN-212ENST00000515397 RNF103-CHMP3A0A140T963 221 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 OR2M5A3KFT3 312 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 TTC36A6NLP5 189 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 HSPB2A8KAH6 182 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 H3BML4 177 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 HDAC3O15379 428 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 SEC14L5O43304 696 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 TGM6O95932 706 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 IL2RAP01589 272 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 IFI6P09912 130 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 HPGDP15428 266 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 DDX5P17844 614 aaKnown RBP10.39□□□□□ -0.75
VCAN-212ENST00000515397 POU3F2P20265 443 aaPredicted RBP10.39□□□□□ -0.75
VCAN-212ENST00000515397 TBXA2RP21731 343 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 MATN1P21941 496 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 MSX1P28360 303 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 UQCRC1P31930 480 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 PTGER4P35408 488 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 GCKP35557 465 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 CLDN20P56880 219 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 C17orf67Q0P5P2 114 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 RCAN2Q14206 197 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 HSPB2Q16082 182 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 SMU1Q2TAY7 513 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 FAM174BQ3ZCQ3 159 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 AGBL2Q5U5Z8 902 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 ATG16L1Q676U5 607 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 AAGABQ6PD74 315 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 ZCCHC12Q6PEW1 402 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 ENPP6Q6UWR7 440 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 LACC1Q8IV20 430 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 ZNF614Q8N883 585 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 OR56A1Q8NGH5 318 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 PSMA8Q8TAA3 256 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 RAB8BQ92930 207 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 INTS12Q96CB8 462 aaKnown RBP10.39□□□□□ -0.75
VCAN-212ENST00000515397 OR52B2Q96RD2 323 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 SPOCK3Q9BQ16 436 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 INPP5KQ9BT40 448 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 PCDHGB3Q9Y5G1 929 aa10.39□□□□□ -0.75
VCAN-212ENST00000515397 PRSS51A0A1B0GVH4 220 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 CD8B2A6NJW9 211 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 ALG1L2C9J202 215 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 SCDO00767 359 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 FCMRO60667 390 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 GSNP06396 782 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 OR12D1P0DN82 309 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 ZNF708P17019 499 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 ATP6V1C1P21283 382 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 S100A3P33764 101 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 TIMP3P35625 211 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 C21orf58P58505 322 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 TLE4Q04727 773 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.38□□□□□ -0.75
VCAN-212ENST00000515397 FLYWCH1Q4VC44 716 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 DCST2Q5T1A1 773 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.38□□□□□ -0.75
VCAN-212ENST00000515397 TNFAIP8L2Q6P589 184 aaPredicted RBP10.38□□□□□ -0.75
VCAN-212ENST00000515397 CBLN3Q6UW01 205 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 GDF7Q7Z4P5 450 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 CAMKMTQ7Z624 323 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 OR8J2Q8NGG1 315 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 RFWD2Q8NHY2 731 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 PHOSPHO1Q8TCT1 267 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 ZPLD1Q8TCW7 415 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 FIG4Q92562 907 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 ZNF524Q96C55 264 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 ZNF845Q96IR2 970 aaPredicted RBP10.38□□□□□ -0.75
VCAN-212ENST00000515397 RUBCNLQ9H714 662 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 TMEM185BQ9H7F4 350 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 PTGES2Q9H7Z7 377 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 CALHM2Q9HA72 323 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 SLCO1B3Q9NPD5 702 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 UBQLN4Q9NRR5 601 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 DUSP22Q9NRW4 184 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 AIG1Q9NVV5 245 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 PCDHGB4Q9UN71 923 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 CARD8Q9Y2G2 431 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 MRPS18CQ9Y3D5 142 aaKnown RBP10.38□□□□□ -0.75
VCAN-212ENST00000515397 GPR45Q9Y5Y3 372 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 MPDZO75970 2070 aa10.38□□□□□ -0.75
VCAN-212ENST00000515397 CENPVL1A0A0U1RR11 272 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 MBD3L4A6NDZ8 208 aaPredicted RBP10.37□□□□□ -0.75
VCAN-212ENST00000515397 MBD3L3A6NE82 208 aaPredicted RBP10.37□□□□□ -0.75
VCAN-212ENST00000515397 MBD3L5A6NJ08 208 aaPredicted RBP10.37□□□□□ -0.75
VCAN-212ENST00000515397 EEF1E1-BLOC1S5C9J1V9 151 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 RNASET2O00584 256 aaKnown RBP10.37□□□□□ -0.75
VCAN-212ENST00000515397 ZNF195O14628 629 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 EEF1E1O43324 174 aaKnown RBP10.37□□□□□ -0.75
VCAN-212ENST00000515397 HCRTR2O43614 444 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 DIAPH2O60879 1101 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 SNUPNO95149 360 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms