RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 SGPP2Q8IWX5 399 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 ARFGAP1Q8N6T3 406 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 SYNPRQ8TBG9 265 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 POC1BQ8TC44 478 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 STK35Q8TDR2 534 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 C3orf30Q96M34 536 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 LPAR4Q99677 370 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 PLEKHA3Q9HB20 300 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 COQ3Q9NZJ6 369 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 IFT172Q9UG01 1749 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 GABRR3A8MPY1 467 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 CRHBPP24387 322 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 ALDH3B1P43353 468 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 SLC6A8P48029 635 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 ZNF140P52738 457 aaPredicted RBP9.99□□□□□ -0.81
NEK1-206ENST00000510533 WDR5P61964 334 aaKnown RBP9.99□□□□□ -0.81
NEK1-206ENST00000510533 MGAT3Q09327 533 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 TDGQ13569 410 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 PTPRRQ15256 657 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 PIANPQ8IYJ0 282 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 GPR26Q8NDV2 337 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 ACVR1CQ8NER5 493 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 SDR9C7Q8NEX9 313 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 OR56B2PQ8NGI1 322 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 TOMM40LQ969M1 308 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 METTL2AQ96IZ6 378 aaKnown RBP9.99□□□□□ -0.81
NEK1-206ENST00000510533 SPIN2AQ99865 258 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 SPIN2BQ9BPZ2 258 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 ALOXE3Q9BYJ1 711 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 SLC25A18Q9H1K4 315 aa9.99□□□□□ -0.81
NEK1-206ENST00000510533 DDX31Q9H8H2 851 aaKnown RBP9.99□□□□□ -0.81
NEK1-206ENST00000510533 LOC105369274A0A096LPK9 316 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 KDM4FA0A1W2PPD8 638 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 A6NIZ1 184 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 WASH4PA8MWX3 477 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 TGM5O43548 720 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 IFNA17P01571 189 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 P04436 131 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 ZNF888P0CJ79 500 aaPredicted RBP9.98□□□□□ -0.81
NEK1-206ENST00000510533 RPL35P42766 123 aaKnown RBP9.98□□□□□ -0.81
NEK1-206ENST00000510533 FXYD4P59646 89 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 RAP1BP61224 184 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 RAP1AP62834 184 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 CBLL1Q75N03 491 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 MRPL10Q7Z7H8 261 aaKnown RBP9.98□□□□□ -0.81
NEK1-206ENST00000510533 OR4N4Q8N0Y3 316 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 TTC9BQ8N6N2 239 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 SPTSSAQ969W0 71 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 MROH6A6NGR9 719 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 HMGN2P05204 90 aaKnown RBP9.98□□□□□ -0.81
NEK1-206ENST00000510533 MSX1P28360 303 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 BDKRB2P30411 391 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 VIPR2P41587 438 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 PSPHP78330 225 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 GPR50Q13585 617 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 DEFB110Q30KQ9 67 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 PDZD3Q86UT5 571 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 BOLLQ8N9W6 283 aaKnown RBP9.98□□□□□ -0.81
NEK1-206ENST00000510533 ABHD5Q8WTS1 349 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 TCTEX1D2Q8WW35 142 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 SYT11Q9BT88 431 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 HINT2Q9BX68 163 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 C1QTNF2Q9BXJ5 285 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 ARHGAP39Q9C0H5 1083 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 CLMPQ9H6B4 373 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 BIN3Q9NQY0 253 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 USP36Q9P275 1121 aaKnown RBP9.98□□□□□ -0.81
NEK1-206ENST00000510533 PHRF1Q9P1Y6 1649 aaKnown RBP9.98□□□□□ -0.81
NEK1-206ENST00000510533 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.98□□□□□ -0.81
NEK1-206ENST00000510533 A0A0U1RQS6 177 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 RAD1O60671 282 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 HPGDSO60760 199 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 CRYZL1O95825 349 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 EGFP01133 1207 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 SERPINA5P05154 406 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 CSF2RAP15509 400 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 RAB3AP20336 220 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 TBCEQ15813 527 aaPredicted RBP9.98□□□□□ -0.81
NEK1-206ENST00000510533 BCL2A1Q16548 175 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 HACD4Q5VWC8 232 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 ZNF695Q8IW36 515 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 TMEM151BQ8IW70 566 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 CNTN4Q8IWV2 1026 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 BEST4Q8NFU0 473 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 BRIX1Q8TDN6 353 aaKnown RBP9.98□□□□□ -0.81
NEK1-206ENST00000510533 CRYGNQ8WXF5 182 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 TM9SF4Q92544 642 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 FOXJ1Q92949 421 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 IRS2Q9Y4H2 1338 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 GJE1A6NN92 205 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 HNRNPKP61978 463 aaKnown RBP eCLIP9.98□□□□□ -0.81
NEK1-206ENST00000510533 FOXK1P85037 733 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 COL9A2Q14055 689 aaPredicted RBP9.98□□□□□ -0.81
NEK1-206ENST00000510533 PIP5KL1Q5T9C9 394 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 FAM71F1Q96KD3 344 aaPredicted RBP9.98□□□□□ -0.81
NEK1-206ENST00000510533 SORBS1Q9BX66 1292 aaKnown RBP9.98□□□□□ -0.81
NEK1-206ENST00000510533 FBRSQ9HAH7 460 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 CD300AQ9UGN4 299 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 SLC6A5Q9Y345 797 aa9.98□□□□□ -0.81
NEK1-206ENST00000510533 A0A1W2PQ09 198 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms