RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 BDKRB2P30411 391 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 GRK4P32298 578 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 SPAM1P38567 509 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 RFC3P40938 356 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 RPS15P62841 145 aaKnown RBP6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 ACSM2AQ08AH3 577 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 HABP2Q14520 560 aaPredicted RBP6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 KCNAB1Q14722 419 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 TAF13Q15543 124 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 USF2Q15853 346 aaPredicted RBP6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 XKR6Q5GH73 641 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 AVPI1Q5T686 147 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 ACSM2BQ68CK6 577 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 FBXL22Q6P050 247 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 DCUN1D3Q8IWE4 304 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 C17orf47Q8NEP4 570 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 OR10H4Q8NGA5 316 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 OR10H5Q8NGA6 315 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 OR5M3Q8NGP4 307 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 THOC3Q96J01 351 aaKnown RBP6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 SLC25A18Q9H1K4 315 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 DZANK1Q9NVP4 752 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 SPG21Q9NZD8 308 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 FBXW2Q9UKT8 454 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 PCDHB10Q9UN67 800 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 MRPS23Q9Y3D9 190 aaKnown RBP6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 MED19A0JLT2 244 aaPredicted RBP6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 URADA6NGE7 173 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 C2orf81A6NN90 581 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF197O14709 1029 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 PRMT3O60678 531 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 RAMP2O60895 175 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 CLN5O75503 358 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 LGI1O95970 557 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 TGFB1P01137 390 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 AMD1P17707 334 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 MMP11P24347 488 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 HMGB2P26583 209 aaKnown RBP6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 ID4P47928 161 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 BACE1P56817 501 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 INTS6LQ5JSJ4 861 aaKnown RBP6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 AFMIDQ63HM1 303 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 PODNL1Q6PEZ8 512 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 NCEH1Q6PIU2 408 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 GDPGP1Q6ZNW5 385 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 TTLL10Q6ZVT0 673 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 HTR3DQ70Z44 454 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 LIMS2Q7Z4I7 341 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 TMED4Q7Z7H5 227 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 SERPINA9Q86WD7 417 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 VRK3Q8IV63 474 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 HS6ST3Q8IZP7 471 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 CCDC54Q8NEL0 328 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 OR8J1Q8NGP2 316 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 LINC01599Q8WXQ3 324 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 S100PBPQ96BU1 408 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 ZC3H10Q96K80 434 aaKnown RBP6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF354BQ96LW1 612 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 AMDHD1Q96NU7 426 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 CLCC1Q96S66 551 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 MAPKAP1Q9BPZ7 522 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF251Q9BRH9 671 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 ASB8Q9H765 288 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 SYNPO2LQ9H987 977 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 CYSLTR2Q9NS75 346 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 NDRG3Q9UGV2 375 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 DERAQ9Y315 318 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 DHRS7Q9Y394 339 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 SCN2AQ99250 2005 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 ANK1P16157 1881 aa6.8□□□□□ -1.32
LIMCH1-207ENST00000508466 PYCARD-AS1I3L0S3 204 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 J3QLW9 94 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 KLK8O60259 260 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF19P17023 458 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 ZNF3P17036 446 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 SLC1A3P43003 542 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 XCR1P46094 333 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 GCGRP47871 477 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 P2RY4P51582 365 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 PGDP52209 483 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 RPS24P62847 133 aaKnown RBP6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 S100A12P80511 92 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 MAD2L1Q13257 205 aaPredicted RBP6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 SMAD4Q13485 552 aaKnown RBP6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 TTLL9Q3SXZ7 439 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 FAM69AQ5T7M9 428 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 OR52W1Q6IF63 320 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 TCTN3Q6NUS6 607 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 SFXN4Q6P4A7 337 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 C11orf96Q7Z7L8 435 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 ETFBKMTQ8IXQ9 262 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 CHCHD4Q8N4Q1 142 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 FBXO15Q8NCQ5 510 aaPredicted RBP6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 OR5D16Q8NGK9 328 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 OR5M9Q8NGP3 310 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 WFIKKN2Q8TEU8 576 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 HGDQ93099 445 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 HHIPQ96QV1 700 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 SLC6A16Q9GZN6 736 aa6.79□□□□□ -1.32
LIMCH1-207ENST00000508466 POLR1EQ9GZS1 481 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms