RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ATP12AP54707 1039 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 ROR2Q01974 943 aaKnown RBP6.62□□□□□ -1.35
CLCN3-206ENST00000507875 SNTB1Q13884 538 aaKnown RBP6.62□□□□□ -1.35
CLCN3-206ENST00000507875 ELOCQ15369 112 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 HIST2H2ACQ16777 129 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-206ENST00000507875 MSMPQ1L6U9 139 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 AASDHQ4L235 1098 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-206ENST00000507875 XKR7Q5GH72 579 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 THEM4Q5T1C6 240 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 C6orf183Q5T699 404 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 LPCAT4Q643R3 524 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 ATG9BQ674R7 924 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 HIST2H2AA3Q6FI13 130 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 LAIR1Q6GTX8 287 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 CCDC144NLQ6NUI1 221 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 ZFP1Q6P2D0 407 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 HACD2Q6Y1H2 254 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 SLC51BQ86UW2 128 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 GKN2Q86XP6 184 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 SYT12Q8IV01 421 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 FUNDC1Q8IVP5 155 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 DDIASQ8IXT1 998 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 LRRC56Q8IYG6 542 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-206ENST00000507875 SLC38A6Q8IZM9 456 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 FAM185AQ8N0U4 392 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 NATD1Q8N6N6 113 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 RNF148Q8N7C7 305 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 SUMF1Q8NBK3 374 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 BHLHE22Q8NFJ8 381 aaPredicted RBP6.62□□□□□ -1.35
CLCN3-206ENST00000507875 OR9I1Q8NGQ6 314 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 OR13C2Q8NGS9 318 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 ASB9Q96DX5 294 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 PPP3R2Q96LZ3 170 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 METTL7AQ9H8H3 244 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 SPAG4Q9NPE6 437 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 ADA2Q9NZK5 511 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 PTGDR2Q9Y5Y4 395 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 CSNK1G3Q9Y6M4 447 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 VPS13AQ96RL7 3174 aa6.62□□□□□ -1.35
CLCN3-206ENST00000507875 GAGE10A6NGK3 116 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 FAM90A8PA6NJQ4 464 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 GLOD5A6NK44 160 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 EIF4E1BA6NMX2 242 aaKnown RBP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 E7ENX8 843 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 TLR4O00206 839 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 MRASO14807 208 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 CRTAPO75718 401 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 CSF2P04141 144 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 FAM90A13PP0C7W8 464 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 FAM90A24PP0C7X0 464 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 LINC00032P0C843 101 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 GNSP15586 552 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 PKLRP30613 574 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 RYKP34925 604 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 HSPA13P48723 471 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 AGTR2P50052 363 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 MEOX1P50221 254 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 RAB28P51157 221 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 CHN2P52757 468 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 CLDN2P57739 230 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 RELAQ04206 551 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 FZD2Q14332 565 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 GRB7Q14451 532 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 TRIP10Q15642 601 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 RPE65Q16518 533 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 LRRC36Q1X8D7 754 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 KIF19Q2TAC6 998 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 PDCD4Q53EL6 469 aaKnown RBP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 C8orf82Q6P1X6 216 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 PRR23BQ6ZRT6 265 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 ASPGQ86U10 573 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 TBC1D19Q8N5T2 526 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 OR4F6Q8NGB9 312 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 C2CD4CQ8TF44 421 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 C12orf66Q96MD2 445 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 TPSD1Q9BZJ3 242 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 FZD3Q9NPG1 666 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 ZNF275Q9NSD4 429 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 CENPMQ9NSP4 180 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 KCNE1BA0A087WTH5 132 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 A0A1B0GTW7 788 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 RAB19A4D1S5 217 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 C5orf51A6NDU8 294 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 OR6C76A6NM76 312 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 BBIP1A8MTZ0 92 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 A8MZ25 164 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 FOXE1O00358 373 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 BCAT2O15382 392 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 LRP3O75074 770 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 RSL1D1O76021 490 aaKnown RBP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 OR4F21O95013 312 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 ZFPL1O95159 310 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 IFNA14P01570 189 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 C1GALT1C1LP0DN25 315 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 PRPS2P11908 318 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 CTSEP14091 401 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 S100A1P23297 94 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 PRDX3P30048 256 aaKnown RBP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 BDKRB1P46663 353 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 NXPH1P58417 271 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms