RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 LIN28AQ9H9Z2 209 aaKnown RBP6.56□□□□□ -1.36
GPATCH4-209ENST00000498641 ZNF556Q9HAH1 456 aa6.56□□□□□ -1.36
GPATCH4-209ENST00000498641 ZBTB20Q9HC78 741 aaPredicted RBP6.56□□□□□ -1.36
GPATCH4-209ENST00000498641 CTPS2Q9NRF8 586 aa6.56□□□□□ -1.36
GPATCH4-209ENST00000498641 UBQLN4Q9NRR5 601 aa6.56□□□□□ -1.36
GPATCH4-209ENST00000498641 USE1Q9NZ43 259 aa6.56□□□□□ -1.36
GPATCH4-209ENST00000498641 TCFL5Q9UL49 500 aa6.56□□□□□ -1.36
GPATCH4-209ENST00000498641 PPIEQ9UNP9 301 aaKnown RBP6.56□□□□□ -1.36
GPATCH4-209ENST00000498641 PCDHGA10Q9Y5H3 936 aa6.56□□□□□ -1.36
GPATCH4-209ENST00000498641 USP34Q70CQ2 3546 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 DNAH14Q0VDD8 3507 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 LOC102723996A0A087X1L8 192 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 IGHV1-45A0A0A0MS14 117 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 NSG1A0A0A6YYJ2 146 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 TRBV4-1A0A0J9YWV2 114 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 CDHR4A6H8M9 788 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 SERINC4A6NH21 518 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 H3BNH8 94 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 GTPBP1O00178 669 aaKnown RBP6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 WWP2O00308 870 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 FAAHO00519 579 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 TO15178 435 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 DENRO43583 198 aaKnown RBP6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 OR10H3O60404 316 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 RAD1O60671 282 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 DKK1O94907 266 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 CSTAP01040 98 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 CYP4B1P13584 511 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 PRG2P13727 222 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 ANXA8P13928 327 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 MMP11P24347 488 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 ABCD3P28288 659 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 LCN1P31025 176 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 DLSTP36957 453 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 CAPGP40121 348 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 CLK3P49761 638 aaKnown RBP6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 DAPP51397 102 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 HMGA2P52926 109 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 TPD52P55327 224 aaPredicted RBP6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 RPS18P62269 152 aaKnown RBP6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 GABREP78334 506 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 PPP2R2BQ00005 443 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 ST3GAL3Q11203 375 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 EPS8Q12929 822 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 DNASE1L3Q13609 305 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 SSPNQ14714 243 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 TRAM2Q15035 370 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 PCOLCEQ15113 449 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 PDK3Q15120 406 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 EXT1Q16394 746 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 RFX4Q33E94 735 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 NHSL2Q5HYW2 709 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 ENTPD8Q5MY95 495 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 ANKRD34AQ69YU3 496 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 NDUFAF7Q7L592 441 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 RRM2BQ7LG56 351 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 ZNF550Q7Z398 422 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 MARCH9Q86YJ5 346 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 CMIPQ8IY22 773 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 OFCC1Q8IZS5 231 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 CACTIN-AS1Q8N1I8 211 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 SLC5A8Q8N695 610 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 AMER2Q8N7J2 671 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 ZNF441Q8N8Z8 693 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 ZSCAN1Q8NBB4 408 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 C17orf47Q8NEP4 570 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 OR8K3Q8NH51 312 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 NUBPLQ8TB37 319 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 PHOSPHO1Q8TCT1 267 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 OIT3Q8WWZ8 545 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 CNOT9Q92600 299 aaKnown RBP6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 TFAP2CQ92754 450 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 SLC38A4Q969I6 547 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 OMA1Q96E52 524 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 SLC41A3Q96GZ6 507 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 ZNF570Q96NI8 536 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 RDH12Q96NR8 316 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 FEVQ99581 238 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 ZNF559Q9BR84 538 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 ADI1Q9BV57 179 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 GPR87Q9BY21 358 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 SPRY4Q9C004 299 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 B3GNT4Q9C0J1 378 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 TOR3AQ9H497 397 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 RIBC2Q9H4K1 309 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 POLR1BQ9H9Y6 1135 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 TMEM27Q9HBJ8 222 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 KRT84Q9NSB2 600 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 WDR70Q9NW82 654 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 RPS6KB2Q9UBS0 482 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 ZNF223Q9UK11 482 aaPredicted RBP6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 KCND3Q9UK17 655 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 A4GNTQ9UNA3 340 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 SLC35A3Q9Y2D2 325 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 NTNG1Q9Y2I2 539 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 CHST2Q9Y4C5 530 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 HS3ST3B1Q9Y662 390 aa6.55□□□□□ -1.36
GPATCH4-209ENST00000498641 ZNF318Q5VUA4 2279 aa6.54□□□□□ -1.36
GPATCH4-209ENST00000498641 A0A1W2PRQ8 180 aa6.54□□□□□ -1.36
GPATCH4-209ENST00000498641 SH3PXD2BA1X283 911 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms