RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 DCAF16Q9NXF7 216 aa2.06□□□□□ -2.08
NF1-213ENST00000489712 CNOT2Q9NZN8 540 aaKnown RBP2.06□□□□□ -2.08
NF1-213ENST00000489712 VPS54Q9P1Q0 977 aa2.06□□□□□ -2.08
NF1-213ENST00000489712 LAMP5Q9UJQ1 280 aa2.06□□□□□ -2.08
NF1-213ENST00000489712 HPCAL4Q9UM19 191 aa2.06□□□□□ -2.08
NF1-213ENST00000489712 MRPS7Q9Y2R9 242 aaKnown RBP2.06□□□□□ -2.08
NF1-213ENST00000489712 NCAPD2Q15021 1401 aa2.06□□□□□ -2.08
NF1-213ENST00000489712 ANKRD30BLA7E2S9 258 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 C11orf98E9PRG8 122 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 WWP2O00308 870 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 MAGEB3O15480 346 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 VPS26AO75436 327 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 TOM1L1O75674 476 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 SNX4O95219 450 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 SYNGR4O95473 234 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 KRT8P05787 483 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 PDHBP11177 359 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 PSG2P11465 335 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 HNRNPA2B1P22626 353 aaKnown RBP2.05□□□□□ -2.08
NF1-213ENST00000489712 PRDX6P30041 224 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 NAPAP54920 295 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 ACTR1AP61163 376 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 HAND2P61296 217 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 HERV-K104P63124 156 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 LRRC63Q05C16 580 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 ORC2Q13416 577 aaPredicted RBP2.05□□□□□ -2.08
NF1-213ENST00000489712 RIPK1Q13546 671 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 PDIA5Q14554 519 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 EXOSC7Q15024 291 aaKnown RBP2.05□□□□□ -2.08
NF1-213ENST00000489712 GPAT3Q53EU6 434 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 CEP55Q53EZ4 464 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 TMEM41BQ5BJD5 291 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 SPATA46Q5T0L3 261 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 AGBL2Q5U5Z8 902 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 LRRC8BQ6P9F7 803 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 ATRAIDQ6UW56 229 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 ARMCX2Q7L311 632 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 TSEN54Q7Z6J9 526 aaKnown RBP2.05□□□□□ -2.08
NF1-213ENST00000489712 TMEM179BQ7Z7N9 219 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 VPS36Q86VN1 386 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 AMZ2Q86W34 360 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 PYROXD2Q8N2H3 581 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 CERS5Q8N5B7 392 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 COLGALT1Q8NBJ5 622 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 OR52B4Q8NGK2 314 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 DQX1Q8TE96 717 aaKnown RBP2.05□□□□□ -2.08
NF1-213ENST00000489712 GIPC3Q8TF64 312 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 PHYHIPQ92561 330 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 LHX4Q969G2 390 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 SLC25A38Q96DW6 304 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 MRPL53Q96EL3 112 aaKnown RBP2.05□□□□□ -2.08
NF1-213ENST00000489712 CCDC51Q96ER9 411 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 DTNBP1Q96EV8 351 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 TTC25Q96NG3 672 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 ERP44Q9BS26 406 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 TCHPQ9BT92 498 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 CCSER1Q9C0I3 900 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 SIRPDQ9H106 197 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 ACTR8Q9H981 624 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 PALMDQ9NP74 551 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 EXOSC3Q9NQT5 275 aaKnown RBP2.05□□□□□ -2.08
NF1-213ENST00000489712 C6orf203Q9P0P8 240 aaPredicted RBP2.05□□□□□ -2.08
NF1-213ENST00000489712 ATP6V1HQ9UI12 483 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 RAB26Q9ULW5 256 aa2.05□□□□□ -2.08
NF1-213ENST00000489712 C15orf38-AP3S2A0A0A6YYH1 394 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 A0A0U1RRA0 63 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 A8MUI8 341 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 TCP11X1B4DZS4 312 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 EI24O14681 340 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 ABCC4O15439 1325 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 CFLARO15519 480 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 RANBP6O60518 1105 aaKnown RBP2.04□□□□□ -2.08
NF1-213ENST00000489712 MTX2O75431 263 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 GPX5O75715 221 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 GSTA1P08263 222 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 PAICSP22234 425 aaKnown RBP2.04□□□□□ -2.08
NF1-213ENST00000489712 GLRA2P23416 452 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 ACVR1BP36896 505 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 ACADSBP45954 432 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 SULT1E1P49888 294 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 ARFIP1P53367 373 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 NUCB2P80303 420 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 EBI3Q14213 229 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 HERPUD1Q15011 391 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 ZKSCAN8Q15776 578 aaPredicted RBP2.04□□□□□ -2.08
NF1-213ENST00000489712 KIF7Q2M1P5 1343 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 USH1GQ495M9 461 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 SLC36A3Q495N2 470 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 NADK2Q4G0N4 442 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 FILIP1LQ4L180 1135 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 MEDAGQ5VYS4 303 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 FAM159AQ6UWV7 190 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 BNIPLQ7Z465 357 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 BCORP1Q8N888 145 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 NCLNQ969V3 563 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 RAB39BQ96DA2 213 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 KIF16BQ96L93 1317 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 GPR137Q96N19 417 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 CCT7Q99832 543 aa2.04□□□□□ -2.08
NF1-213ENST00000489712 JPH2Q9BR39 696 aaPredicted RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms