RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ARNTLO00327 626 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 RFPL3O75679 317 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 AHRP35869 848 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 MRPL49Q13405 166 aaKnown RBP16.6■□□□□ 0.25
NPHP4-209ENST00000489180 PODNL1Q6PEZ8 512 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 TMPPEQ6ZT21 453 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 METTL2AQ96IZ6 378 aaKnown RBP16.6■□□□□ 0.25
NPHP4-209ENST00000489180 C4orf36Q96KX1 117 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 ZNF175Q9Y473 711 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 IRS2Q9Y4H2 1338 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 CIB4A0PJX0 185 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 VSTM5A8MXK1 200 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 CNMDO75829 334 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 DLSTP36957 453 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 ERVK-25P63136 954 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 METTL11BQ5VVY1 283 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 GPR137CQ8N3F9 429 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 TPSD1Q9BZJ3 242 aa16.6■□□□□ 0.25
NPHP4-209ENST00000489180 NUPL2O15504 423 aaKnown RBP16.59■□□□□ 0.25
NPHP4-209ENST00000489180 RAB3DO95716 219 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 SOX9P48436 509 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 BCL7AQ4VC05 210 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 GPR149Q86SP6 731 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 FOXJ1Q92949 421 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 NT5C3BQ969T7 300 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 NELFAQ9H3P2 528 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 HCFC1R1Q9NWW0 138 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 MPIG6BO95866 241 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 EPHA1P21709 976 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 RGRP47804 291 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 CTSCP53634 463 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 VRK2Q86Y07 508 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 UEVLDQ8IX04 471 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 SULT4A1Q9BR01 284 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 NTMT1Q9BV86 223 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 RABL2AQ9UBK7 228 aaPredicted RBP16.59■□□□□ 0.25
NPHP4-209ENST00000489180 FTSJ1Q9UET6 329 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 RABL2BQ9UNT1 228 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 hCG_1807616A0A1W2PRN6 198 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 GGT3PA6NGU5 568 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 CENPBD1B2RD01 187 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 MRPS14O60783 128 aaKnown RBP16.59■□□□□ 0.25
NPHP4-209ENST00000489180 ACPPP15309 386 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 AKR1C2P52895 323 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 ECH1Q13011 328 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 MALLQ13021 153 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 GDPGP1Q6ZNW5 385 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 PBDC1Q9BVG4 233 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 HEBP1Q9NRV9 189 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 LRP6O75581 1613 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 NUDT7P0C024 238 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 CCNJQ5T5M9 372 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 MRPL10Q7Z7H8 261 aaKnown RBP16.59■□□□□ 0.25
NPHP4-209ENST00000489180 ATOH8Q96SQ7 321 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 RASD1Q9Y272 281 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 RDH16O75452 317 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 IFNA1P01562 189 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 HRGP04196 525 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 MSL3P1P0C860 447 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 PSMB5P28074 263 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 TNFSF8P32971 234 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 TAP2Q03519 686 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 RBM39Q14498 530 aaKnown RBP16.59■□□□□ 0.25
NPHP4-209ENST00000489180 LEXMQ3ZCV2 418 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 TRNP1Q6NT89 227 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 LCTLQ6UWM7 567 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 BEST4Q8NFU0 473 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 KLHL15Q96M94 604 aa16.59■□□□□ 0.25
NPHP4-209ENST00000489180 MYH13Q9UKX3 1938 aa16.58■□□□□ 0.25
NPHP4-209ENST00000489180 GIFP27352 417 aa16.58■□□□□ 0.25
NPHP4-209ENST00000489180 SLC5A2P31639 672 aa16.58■□□□□ 0.25
NPHP4-209ENST00000489180 SFTPDP35247 375 aa16.58■□□□□ 0.25
NPHP4-209ENST00000489180 PRPS1P60891 318 aa16.58■□□□□ 0.25
NPHP4-209ENST00000489180 CXCR4P61073 352 aa16.58■□□□□ 0.25
NPHP4-209ENST00000489180 RPL3LQ92901 407 aaKnown RBP16.58■□□□□ 0.25
NPHP4-209ENST00000489180 TMEM68Q96MH6 324 aa16.58■□□□□ 0.25
NPHP4-209ENST00000489180 HINT2Q9BX68 163 aa16.58■□□□□ 0.25
NPHP4-209ENST00000489180 DZANK1Q9NVP4 752 aa16.58■□□□□ 0.25
NPHP4-209ENST00000489180 RAB33AQ14088 237 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 CBARPQ8N350 705 aaPredicted RBP16.58■□□□□ 0.24
NPHP4-209ENST00000489180 ACOT4Q8N9L9 421 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 CHPT1Q8WUD6 406 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 BADQ92934 168 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 PRRC1Q96M27 445 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 CTDSP2O14595 271 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 NTSR1P30989 418 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 TLE3Q04726 772 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 PTPRRQ15256 657 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 CBLL1Q75N03 491 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 OR4F15Q8NGB8 312 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 C16orf58Q96GQ5 468 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 CPNE6O95741 557 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 NOVP48745 357 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 RAB40BQ12829 278 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 EXOSC7Q15024 291 aaKnown RBP16.58■□□□□ 0.24
NPHP4-209ENST00000489180 PDZD3Q86UT5 571 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 PRR18Q8N4B5 295 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 CDRT4Q8N9R6 151 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 GTF2H4Q92759 462 aa16.58■□□□□ 0.24
NPHP4-209ENST00000489180 CNTNAP3BQ96NU0 1288 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms