RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 LYPLA1O75608 230 aaPredicted RBP10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 OPN1LWP04000 364 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 HMGN2P05204 90 aaKnown RBP10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 NGFRP08138 427 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 HPGDP15428 266 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 DDX5P17844 614 aaKnown RBP10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 CPOXP36551 454 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 ETV4P43268 484 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 KIR2DL2P43627 348 aaPredicted RBP10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 SERPINB4P48594 390 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 PRIM2P49643 509 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 SIRPAP78324 504 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 FAM27E3Q08E93 113 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 LASP1Q14847 261 aaKnown RBP10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 MLC1Q15049 377 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 TMEM44Q2T9K0 475 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 OR2A2Q6IF42 318 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 VWA1Q6PCB0 445 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 ZCCHC12Q6PEW1 402 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 BTLAQ7Z6A9 289 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 COX18Q8N8Q8 333 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 PPP1R14CQ8TAE6 165 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 FNDC9Q8TBE3 224 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 OR5P2Q8WZ92 322 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 CDS1Q92903 461 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 TUBGCP3Q96CW5 907 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 PGM2Q96G03 612 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 SH3YL1Q96HL8 342 aaPredicted RBP10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 PKNOX2Q96KN3 472 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 DACH2Q96NX9 599 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 NPAS1Q99742 590 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 BTBD2Q9BX70 525 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 PARD6BQ9BYG5 372 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 UBQLN4Q9NRR5 601 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 AP4B1Q9Y6B7 739 aa10.75□□□□□ -0.69
CCHCR1-215ENST00000488920 SH3D21A4FU49 640 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 SCDO00767 359 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 MSTNO14793 375 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 RGS16O15492 202 aaPredicted RBP10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 CTIFO43310 598 aaKnown RBP10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 ITM2AO43736 263 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 HSPA4LO95757 839 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 C6orf47O95873 294 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 CRHP06850 196 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 G6PDP11413 515 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 PRPS1L1P21108 318 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 DNASE1P24855 282 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 RPL3P39023 403 aaKnown RBP10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 CCT3P49368 545 aaKnown RBP10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 RNF144AP50876 292 aaPredicted RBP10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 POU6F2P78424 691 aaPredicted RBP10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 ZNF844Q08AG5 666 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 PON3Q15166 354 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 POU4F3Q15319 338 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 SGCBQ16585 318 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 PGS1Q32NB8 556 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 KRT71Q3SY84 523 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 SPDYE7PQ495Y7 208 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 EXOSC6Q5RKV6 272 aaKnown RBP10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 NINJ1Q92982 152 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 COQ8BQ96D53 544 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 PPP1R36Q96LQ0 422 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 PRPF18Q99633 342 aaKnown RBP10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 FOXC2Q99958 501 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 KLHDC3Q9BQ90 382 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 OPN3Q9H1Y3 402 aaPredicted RBP10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 PIGUQ9H490 435 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 CXorf36Q9H7Y0 433 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 RNF122Q9H9V4 155 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 ATAD3AQ9NVI7 634 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 GIN1Q9NXP7 522 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 EIF3LQ9Y262 564 aaKnown RBP10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 KCNE3Q9Y6H6 103 aa10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 ANKHD1Q8IWZ3 2542 aaKnown RBP10.74□□□□□ -0.69
CCHCR1-215ENST00000488920 A0A087WZY1 265 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 EIF1AYO14602 144 aaKnown RBP10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 CASKO14936 926 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 CFLARO15519 480 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 AQP8O94778 261 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 LCN1P31025 176 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 EIF1AXP47813 144 aaKnown RBP10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 SLC6A8P48029 635 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 RPS3AP61247 264 aaKnown RBP10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 TP53BP2Q13625 1128 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 CD226Q15762 336 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 CHI3L2Q15782 390 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 PDCD2Q16342 344 aaPredicted RBP10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 LSM12Q3MHD2 195 aaKnown RBP10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 PPP4R4Q6NUP7 873 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 CDC73Q6P1J9 531 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 ZNF474Q6S9Z5 364 aaPredicted RBP10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 GGNQ86UU5 652 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 RIMKLAQ8IXN7 391 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 MREGQ8N565 214 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 METTL25Q8N6Q8 603 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 ZNF610Q8N9Z0 462 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 WFIKKN1Q96NZ8 548 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 STACQ99469 402 aa10.73□□□□□ -0.69
CCHCR1-215ENST00000488920 ACTRT3Q9BYD9 372 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms