RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 NUP62P37198 522 aaPredicted RBP3.31□□□□□ -1.88
FN1-222ENST00000485567 SLC11A1P49279 550 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 ATP4BP51164 291 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 AIF1P55008 147 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 PLTPP55058 493 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 RAG2P55895 527 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 ZNF85Q03923 595 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 CUL1Q13616 776 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 TRIP10Q15642 601 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 PDK4Q16654 411 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 PCK2Q16822 640 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 CYBRD1Q53TN4 286 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 GFI1BQ5VTD9 330 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 NCR3LG1Q68D85 454 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 ZNF772Q68DY9 489 aaPredicted RBP3.31□□□□□ -1.88
FN1-222ENST00000485567 PDPK2PQ6A1A2 396 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 TMEM184AQ6ZMB5 413 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 ERASQ7Z444 233 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 C4orf32Q8N8J7 132 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 C17orf47Q8NEP4 570 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 OR4F17Q8NGA8 305 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 OR5AU1Q8NGC0 362 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 FLVCR1-AS1Q8TAF5 88 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 DNAJA4Q8WW22 397 aaPredicted RBP3.31□□□□□ -1.88
FN1-222ENST00000485567 NR4A3Q92570 626 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 LRRC39Q96DD0 335 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 OR4F4Q96R69 305 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 ZNF607Q96SK3 696 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 LLPHQ9BRT6 129 aaKnown RBP3.31□□□□□ -1.88
FN1-222ENST00000485567 MTG1Q9BT17 334 aaPredicted RBP3.31□□□□□ -1.88
FN1-222ENST00000485567 LRRC61Q9BV99 259 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 MRPL37Q9BZE1 423 aaKnown RBP3.31□□□□□ -1.88
FN1-222ENST00000485567 FAM192AQ9GZU8 254 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 LIME1Q9H400 295 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 EXO5Q9H790 373 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 JPT2Q9H910 190 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 PANK3Q9H999 370 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 ETNK2Q9NVF9 386 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 MLXQ9UH92 298 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 B9D1Q9UPM9 204 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 EIF3LQ9Y262 564 aaKnown RBP3.31□□□□□ -1.88
FN1-222ENST00000485567 GMEB1Q9Y692 573 aa3.31□□□□□ -1.88
FN1-222ENST00000485567 GRIN2DO15399 1336 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 CNTNAP2Q9UHC6 1331 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 TRAV6A0A075B6T7 132 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 GOLGA8SH3BPF8 625 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 SDHDO14521 159 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 LRRTM2O43300 516 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 TBX19O60806 448 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 SEMA4FO95754 770 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 CSTAP01040 98 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 CHRNA1P02708 482 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 TROVE2P10155 538 aaKnown RBP eCLIP3.3□□□□□ -1.88
FN1-222ENST00000485567 GCFC2P16383 781 aaKnown RBP3.3□□□□□ -1.88
FN1-222ENST00000485567 ATP6V1C1P21283 382 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 CA8P35219 290 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 MAGEA1P43355 309 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 HTR5AP47898 357 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 SLC8A3P57103 927 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 TGM3Q08188 693 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 DNAJC3Q13217 504 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 WDR43Q15061 677 aaKnown RBP eCLIP3.3□□□□□ -1.88
FN1-222ENST00000485567 VWA2Q5GFL6 755 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 C10orf120Q5SQS8 335 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 BEND6Q5SZJ8 279 aaPredicted RBP3.3□□□□□ -1.88
FN1-222ENST00000485567 C9orf66Q5T8R8 295 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 ARMC12Q5T9G4 340 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 LIN9Q5TKA1 542 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 REP15Q6BDI9 236 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 ASPHD2Q6ICH7 369 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 PRR5LQ6MZQ0 368 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 EMBQ6PCB8 327 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 DOK6Q6PKX4 331 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 METTL7BQ6UX53 244 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 APOOLQ6UXV4 268 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 TMUB2Q71RG4 321 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 Q7L0L9 218 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 COMTD1Q86VU5 262 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 FAM228AQ86W67 206 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 EFCAB13Q8IY85 973 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 OFCC1Q8IZS5 231 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 ZNF491Q8N8L2 437 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 CSNK1G2-AS1Q8NCQ2 148 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 OR52J3Q8NH60 311 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 ART4Q93070 314 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 ADIPOR1Q96A54 375 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 HPDLQ96IR7 371 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 ARL5BQ96KC2 179 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 TTYH2Q9BSA4 534 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 CCDC28BQ9BUN5 200 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 TRIM9Q9C026 710 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 PNNQ9H307 717 aaKnown RBP3.3□□□□□ -1.88
FN1-222ENST00000485567 RNF41Q9H4P4 317 aaPredicted RBP3.3□□□□□ -1.88
FN1-222ENST00000485567 C8orf33Q9H7E9 229 aaPredicted RBP3.3□□□□□ -1.88
FN1-222ENST00000485567 DCAF13Q9NV06 445 aaKnown RBP3.3□□□□□ -1.88
FN1-222ENST00000485567 ZNF446Q9NWS9 450 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 DUS2Q9NX74 493 aaKnown RBP3.3□□□□□ -1.88
FN1-222ENST00000485567 CHMP5Q9NZZ3 219 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 ANGPTL2Q9UKU9 493 aa3.3□□□□□ -1.88
FN1-222ENST00000485567 BARX2Q9UMQ3 279 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms