RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 POLQO75417 2590 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 DCHS2Q6V1P9 2916 aa11.12□□□□□ -0.63
MSH5-216ENST00000484309 FBN2P35556 2912 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 OR2M5A3KFT3 312 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 HSPB2A8KAH6 182 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 ALG1L2C9J202 215 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 FAM47E-STBD1D6RA91 191 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 H0YC42 278 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 H3BML4 177 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 HDAC3O15379 428 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 SEC14L5O43304 696 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 NDUFB5O43674 189 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 CPN1P15169 458 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 ZNF708P17019 499 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 POU3F2P20265 443 aaPredicted RBP11.11□□□□□ -0.63
MSH5-216ENST00000484309 TBXA2RP21731 343 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 CEACAM8P31997 349 aaPredicted RBP11.11□□□□□ -0.63
MSH5-216ENST00000484309 DGKQP52824 942 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 SLC18A1P54219 525 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 TPD52P55327 224 aaPredicted RBP11.11□□□□□ -0.63
MSH5-216ENST00000484309 UFM1P61960 85 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 C17orf67Q0P5P2 114 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 SF3B4Q15427 424 aaKnown RBP eCLIP11.11□□□□□ -0.632e-6■■■■□ 19.9
MSH5-216ENST00000484309 CD226Q15762 336 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 HSPB2Q16082 182 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 SLC25A35Q3KQZ1 300 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 FAM174BQ3ZCQ3 159 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 SLC9B1Q4ZJI4 515 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 TTMPQ5BVD1 217 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 DCST2Q5T1A1 773 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 NXNQ6DKJ4 435 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 MAVSQ7Z434 540 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 C6orf120Q7Z4R8 191 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 DTNBP1Q96EV8 351 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 SLC35G5Q96KT7 338 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 TEX37Q96LM6 180 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 STACQ99469 402 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 NPAS1Q99742 590 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 SPOCK3Q9BQ16 436 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 DUSP22Q9NRW4 184 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 AIG1Q9NVV5 245 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 MRPS18CQ9Y3D5 142 aaKnown RBP11.11□□□□□ -0.63
MSH5-216ENST00000484309 ZNF337Q9Y3M9 751 aa11.11□□□□□ -0.63
MSH5-216ENST00000484309 ANKRD17O75179 2603 aaKnown RBP11.1□□□□□ -0.63
MSH5-216ENST00000484309 MBD3L4A6NDZ8 208 aaPredicted RBP11.1□□□□□ -0.63
MSH5-216ENST00000484309 MBD3L3A6NE82 208 aaPredicted RBP11.1□□□□□ -0.63
MSH5-216ENST00000484309 MBD3L5A6NJ08 208 aaPredicted RBP11.1□□□□□ -0.63
MSH5-216ENST00000484309 CD8B2A6NJW9 211 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 TRPC5OSA6NMA1 111 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 RNASET2O00584 256 aaKnown RBP11.1□□□□□ -0.63
MSH5-216ENST00000484309 SCDO00767 359 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 DVL2O14641 736 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 OIP5O43482 229 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 SCN2BO60939 215 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 C1QCP02747 245 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 KRT16P08779 473 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 HPGDP15428 266 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 IGFBP2P18065 325 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 ATP6V1C1P21283 382 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 MATN1P21941 496 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 CHMP24386 653 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 IL12AP29459 219 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 UQCRC1P31930 480 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 TIMP3P35625 211 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 CLNS1AP54105 237 aaKnown RBP11.1□□□□□ -0.63
MSH5-216ENST00000484309 DLX5P56178 289 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 FOXF2Q12947 444 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 GANABQ14697 944 aaKnown RBP11.1□□□□□ -0.63
MSH5-216ENST00000484309 OGFOD2Q6N063 350 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 POMZP3Q6PJE2 187 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 GCNT2Q8N0V5 402 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 ZNF614Q8N883 585 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 ACBD4Q8NC06 268 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 OR8J2Q8NGG1 315 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 MBD3L2Q8NHZ7 208 aaPredicted RBP11.1□□□□□ -0.63
MSH5-216ENST00000484309 RAB3IL1Q8TBN0 382 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 ZPLD1Q8TCW7 415 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 ZNF75CPQ92670 426 aaPredicted RBP11.1□□□□□ -0.63
MSH5-216ENST00000484309 TESCQ96BS2 214 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 MOAP1Q96BY2 351 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 ATP6V1G3Q96LB4 118 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 CALHM2Q9HA72 323 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 UBQLN4Q9NRR5 601 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 CLCF1Q9UBD9 225 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 PCDHGB4Q9UN71 923 aa11.1□□□□□ -0.63
MSH5-216ENST00000484309 ANKHD1Q8IWZ3 2542 aaKnown RBP11.09□□□□□ -0.63
MSH5-216ENST00000484309 ADGRG4Q8IZF6 3080 aa11.09□□□□□ -0.63
MSH5-216ENST00000484309 IGLV3-32A0A0A0MS00 114 aa11.09□□□□□ -0.63
MSH5-216ENST00000484309 EEF1E1-BLOC1S5C9J1V9 151 aa11.09□□□□□ -0.63
MSH5-216ENST00000484309 E9PBE3 544 aa11.09□□□□□ -0.63
MSH5-216ENST00000484309 EEF1E1O43324 174 aaKnown RBP11.09□□□□□ -0.63
MSH5-216ENST00000484309 TGM6O95932 706 aa11.09□□□□□ -0.63
MSH5-216ENST00000484309 OPN1LWP04000 364 aa11.09□□□□□ -0.63
MSH5-216ENST00000484309 NGFRP08138 427 aa11.09□□□□□ -0.63
MSH5-216ENST00000484309 TMIGD3P0DMS9 266 aaPredicted RBP11.09□□□□□ -0.63
MSH5-216ENST00000484309 PEPDP12955 493 aa11.09□□□□□ -0.63
MSH5-216ENST00000484309 S100A3P33764 101 aa11.09□□□□□ -0.63
MSH5-216ENST00000484309 SUCLG1P53597 346 aaKnown RBP11.09□□□□□ -0.63
MSH5-216ENST00000484309 CLDN15P56746 228 aa11.09□□□□□ -0.63
MSH5-216ENST00000484309 CLDN20P56880 219 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms