RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 ATP12AP54707 1039 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 ZXDAP98168 799 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 HOXC5Q00444 222 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 KCNAB1Q14722 419 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.39■□□□□ 0.54
CHKB-209ENST00000481673 TMEM71Q6P5X7 295 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 ZNF550Q7Z398 422 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 CDK20Q8IZL9 346 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 CYP4Z2PQ8N1L4 340 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 TCEANCQ8N8B7 351 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 ZNF615Q8N8J6 731 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 Q8N9G6 341 aaPredicted RBP18.39■□□□□ 0.54
CHKB-209ENST00000481673 C16orf52Q8NHV5 167 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 GAB3Q8WWW8 586 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 TRIM2Q9C040 744 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 HOXD1Q9GZZ0 328 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 CBLCQ9ULV8 474 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 ERVK-19Q9WJR5 959 aa18.39■□□□□ 0.54
CHKB-209ENST00000481673 CEP192Q8TEP8 1941 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 DSCR3O14972 297 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 THY1P04216 161 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 IGFBP1P08833 259 aaPredicted RBP18.39■□□□□ 0.53
CHKB-209ENST00000481673 NR0B2Q15466 257 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 RPL13AP3Q6NVV1 102 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 ZNF367Q7RTV3 350 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 NRMQ8IXM6 262 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 RCBTB1Q8NDN9 531 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 OR4C6Q8NH72 309 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 OR1L3Q8NH93 324 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 FAM46AQ96IP4 442 aaKnown RBP18.39■□□□□ 0.53
CHKB-209ENST00000481673 SLC46A1Q96NT5 459 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 DPYSL5Q9BPU6 564 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 ZNF304Q9HCX3 659 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 OR10H1Q9Y4A9 318 aa18.39■□□□□ 0.53
CHKB-209ENST00000481673 CENPVL1A0A0U1RR11 272 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 LAMTOR5O43504 91 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 TLX2O43763 284 aaPredicted RBP18.38■□□□□ 0.53
CHKB-209ENST00000481673 HMGN1P05114 100 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 CT45A8P0DMV1 189 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 CT45A9P0DMV2 189 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 TDGF1P13385 188 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 PGDP52209 483 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 BNC1Q01954 994 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 SNAPC1Q16533 368 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 TIGD6Q17RP2 521 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 KLHL22Q53GT1 634 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 CT45A2Q5DJT8 189 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 LSMEM1Q8N8F7 131 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 FAM181AQ8N9Y4 354 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 TMEM239Q8WW34 195 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 EDAQ92838 391 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 TMEM80Q96HE8 168 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 ART5Q96L15 291 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 YIPF2Q9BWQ6 316 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 CAPN10Q9HC96 672 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 MRTO4Q9UKD2 239 aaKnown RBP18.38■□□□□ 0.53
CHKB-209ENST00000481673 SLC6A14Q9UN76 642 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 SRPK3Q9UPE1 567 aa18.38■□□□□ 0.53
CHKB-209ENST00000481673 A0A1B0GX78 115 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 C17orf105B2RV13 164 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 NPIPB9F8W1W9 429 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 POLR1CO15160 346 aaPredicted RBP18.37■□□□□ 0.53
CHKB-209ENST00000481673 LCKP06239 509 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 ANKRD34CP0C6C1 535 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 CD36P16671 472 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 CSF2RBP32927 897 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 PDZK1Q5T2W1 519 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 ACSM5Q6NUN0 579 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 TSSK4Q6SA08 328 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 KANSL1Q7Z3B3 1105 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 RABEPKQ7Z6M1 372 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 KIF18BQ86Y91 864 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 METTL27Q8N6F8 245 aaPredicted RBP18.37■□□□□ 0.53
CHKB-209ENST00000481673 MAFAQ8NHW3 353 aaPredicted RBP18.37■□□□□ 0.53
CHKB-209ENST00000481673 TMEM163Q8TC26 289 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 TMEM255BQ8WV15 326 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 CCDC74AQ96AQ1 378 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 SENP5Q96HI0 755 aaPredicted RBP18.37■□□□□ 0.53
CHKB-209ENST00000481673 FGF21Q9NSA1 209 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 CNIH4Q9P003 139 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.37■□□□□ 0.53
CHKB-209ENST00000481673 CDH10Q9Y6N8 788 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 MAU2Q9Y6X3 613 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 IGKV3D-11A0A0A0MRZ8 115 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 FOLR1P15328 257 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 ZNF182P17025 639 aaPredicted RBP18.37■□□□□ 0.53
CHKB-209ENST00000481673 FBLP22087 321 aaKnown RBP18.37■□□□□ 0.53
CHKB-209ENST00000481673 LCN1P31025 176 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 CSTF2P33240 577 aaKnown RBP eCLIP18.37■□□□□ 0.53
CHKB-209ENST00000481673 HOXD12P35452 270 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 RBM34P42696 430 aaKnown RBP18.37■□□□□ 0.53
CHKB-209ENST00000481673 PPICP45877 212 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 DCAF7P61962 342 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 LSM11P83369 360 aaKnown RBP eCLIP18.37■□□□□ 0.532e-6■□□□□ 10
CHKB-209ENST00000481673 ACY1Q03154 408 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 FGFBP1Q14512 234 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 SNAP47Q5SQN1 464 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 SLITRK4Q8IW52 837 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 ZNF440Q8IYI8 595 aa18.37■□□□□ 0.53
CHKB-209ENST00000481673 WDR36Q8NI36 951 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms