RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 TRPC4Q9UBN4 977 aa13.77□□□□□ -0.21
LMNA-213ENST00000473598 CLDN16Q9Y5I7 305 aa13.77□□□□□ -0.21
LMNA-213ENST00000473598 A0A0X1KG70 313 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 LINC00854A0A1B0GVQ3 168 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 TGFBR3LH3BV60 316 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 NOS1APO75052 506 aaPredicted RBP13.76□□□□□ -0.21
LMNA-213ENST00000473598 HBQ1P09105 142 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 SOX18P35713 384 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 PRKAG1P54619 331 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 RPS26P62854 115 aaKnown RBP13.76□□□□□ -0.21
LMNA-213ENST00000473598 MC2RQ01718 297 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 RBBP4Q09028 425 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 PRICKLE4Q2TBC4 344 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 ARHGAP40Q5TG30 622 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 PXDC1Q5TGL8 231 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 CEACAM20Q6UY09 585 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 ZNF767PQ75MW2 155 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 HORMAD2Q8N7B1 307 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 C11orf65Q8NCR3 313 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 NUP43Q8NFH3 380 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 OR7G2Q8NG99 324 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 ZNF675Q8TD23 568 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 MAL2Q969L2 176 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 PMEPA1Q969W9 287 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 TMEM80Q96HE8 168 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 SLC35G5Q96KT7 338 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 SCPEP1Q9HB40 452 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 PTGFRNQ9P2B2 879 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 CACNA1AO00555 2505 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 OR7A10O76100 309 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 DKK1O94907 266 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 CST1P01037 141 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 ATXN8OSP0DMR3 200 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 NT5EP21589 574 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 TALDO1P37837 337 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 ETV1P50549 477 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 ALDH3A2P51648 485 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 INSM1Q01101 510 aaPredicted RBP13.76□□□□□ -0.21
LMNA-213ENST00000473598 OTUD3Q5T2D3 398 aaPredicted RBP13.76□□□□□ -0.21
LMNA-213ENST00000473598 SHEQ5VZ18 495 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 TNFAIP8L2Q6P589 184 aaPredicted RBP13.76□□□□□ -0.21
LMNA-213ENST00000473598 XKRXQ6PP77 449 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 MARCH9Q86YJ5 346 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 EID3Q8N140 333 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 OR2L13Q8N349 312 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 LRRC20Q8TCA0 184 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 PYURFQ96I23 114 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 ALOXE3Q9BYJ1 711 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 SERHL2Q9H4I8 314 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 ANKRA2Q9H9E1 313 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 PCDHGA1Q9Y5H4 931 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 SNX5Q9Y5X3 404 aa13.76□□□□□ -0.21
LMNA-213ENST00000473598 CCDC88CQ9P219 2028 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 A0A087WV62 115 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 OR2W5A6NFC9 320 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 ATP6V1G2-DDX39BF2Z307 99 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 CTDSP2O14595 271 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 OR10H2O60403 315 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 SNAP29O95721 258 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 ALPLP05186 524 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 HMGN2P05204 90 aaKnown RBP13.75□□□□□ -0.21
LMNA-213ENST00000473598 IFI6P09912 130 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 CCL4P13236 92 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 MAOAP21397 527 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 PCGF2P35227 344 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 POU6F2P78424 691 aaPredicted RBP13.75□□□□□ -0.21
LMNA-213ENST00000473598 BIKQ13323 160 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 DAG1Q14118 895 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 FHL5Q5TD97 284 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 COX15Q7KZN9 410 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 NOXA1Q86UR1 476 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 ZDHHC13Q8IUH4 622 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 RNF31Q96EP0 1072 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 CMKLR1Q99788 373 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 ING2Q9H160 280 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 OR51I1Q9H343 314 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 MKKSQ9NPJ1 570 aaPredicted RBP13.75□□□□□ -0.21
LMNA-213ENST00000473598 MAT2BQ9NZL9 334 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 MMACHCQ9Y4U1 282 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 FREM2Q5SZK8 3169 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 AKAP13Q12802 2813 aa13.75□□□□□ -0.21
LMNA-213ENST00000473598 ZNF99A8MXY4 864 aaPredicted RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 G3V2T6 193 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 HMGN4O00479 90 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 ARAFP10398 606 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 ELK4P28324 431 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 GP2P55259 537 aaKnown RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 ZNF45Q02386 682 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 MGAT2Q10469 447 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 SCARB2Q14108 478 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 LASP1Q14847 261 aaKnown RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 ZNF630Q2M218 657 aaPredicted RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 TRMT12Q53H54 448 aaKnown RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 VWA2Q5GFL6 755 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 CDCP2Q5VXM1 449 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 FAM111BQ6SJ93 734 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 QSOX2Q6ZRP7 698 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 CTHRC1Q96CG8 243 aa13.74□□□□□ -0.21
LMNA-213ENST00000473598 RBM18Q96H35 190 aaKnown RBP13.74□□□□□ -0.21
LMNA-213ENST00000473598 ASPSCR1Q9BZE9 553 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms