RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 RAP2AP10114 183 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 FCGR1AP12314 374 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 CYP4B1P13584 511 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 ATP6V1B2P21281 511 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 IFNA8P32881 189 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 RFX3P48380 749 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 CRYBA2P53672 197 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 ELF3P78545 371 aaPredicted RBP9.81□□□□□ -0.84
RTF1-202ENST00000462276 DMTNQ08495 405 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 MFAP5Q13361 173 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 RIPK1Q13546 671 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 CCNIQ14094 377 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 DUSP7Q16829 419 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 DEFB109BQ30KR1 87 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 IFI44LQ53G44 452 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 RPS26P11Q5JNZ5 115 aaPredicted RBP9.81□□□□□ -0.84
RTF1-202ENST00000462276 SLC30A6Q6NXT4 461 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 UNQ6494/PRO21346Q6UXR6 183 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 PIWIL3Q7Z3Z3 882 aaKnown RBP9.81□□□□□ -0.84
RTF1-202ENST00000462276 TOR1AIP2Q8NFQ8 470 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 RNF138Q8WVD3 245 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 TM9SF4Q92544 642 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 NR4A3Q92570 626 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 HAS2Q92819 552 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 HGDQ93099 445 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 EFHD2Q96C19 240 aaPredicted RBP9.81□□□□□ -0.84
RTF1-202ENST00000462276 ZG16BQ96DA0 208 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 DTNBP1Q96EV8 351 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 UTP23Q9BRU9 249 aaKnown RBP9.81□□□□□ -0.84
RTF1-202ENST00000462276 TBL1XR1Q9BZK7 514 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 LIN28AQ9H9Z2 209 aaKnown RBP9.81□□□□□ -0.84
RTF1-202ENST00000462276 CPNE5Q9HCH3 593 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 IL1RAPQ9NPH3 570 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 EXOSC3Q9NQT5 275 aaKnown RBP9.81□□□□□ -0.84
RTF1-202ENST00000462276 ARMC1Q9NVT9 282 aa9.81□□□□□ -0.84
RTF1-202ENST00000462276 ZNF443Q9Y2A4 671 aaPredicted RBP9.81□□□□□ -0.84
RTF1-202ENST00000462276 FRYQ5TBA9 3013 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 WDFY3Q8IZQ1 3526 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 GTPBP1O00178 669 aaKnown RBP9.8□□□□□ -0.84
RTF1-202ENST00000462276 HNRNPRO43390 633 aaKnown RBP9.8□□□□□ -0.84
RTF1-202ENST00000462276 NDUFB5O43674 189 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 DPM1O60762 260 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 FMO6PO60774 539 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 DNAJB5O75953 348 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 OXSR1O95747 527 aaPredicted RBP9.8□□□□□ -0.84
RTF1-202ENST00000462276 ITGB2P05107 769 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 UQCRBP14927 111 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 CD247P20963 164 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 MSX1P28360 303 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 EVI2BP34910 448 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 SOX3P41225 446 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 EEF1A1P68104 462 aaKnown RBP9.8□□□□□ -0.84
RTF1-202ENST00000462276 C17orf67Q0P5P2 114 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 SRSF6Q13247 344 aaKnown RBP9.8□□□□□ -0.84
RTF1-202ENST00000462276 GK3PQ14409 553 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 FGFBP1Q14512 234 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 GRAMD1BQ3KR37 738 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 ATP1A1-AS1Q5TC04 95 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 SLC22A10Q63ZE4 541 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 IGFL2Q6UWQ7 119 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 C16orf47Q6ZP98 133 aaPredicted RBP9.8□□□□□ -0.84
RTF1-202ENST00000462276 ZNF550Q7Z398 422 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 ZAR1Q86SH2 424 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 PRR22Q8IZ63 422 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 ADGRG5Q8IZF4 528 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 SIRT6Q8N6T7 355 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 KDF1Q8NAX2 398 aaPredicted RBP9.8□□□□□ -0.84
RTF1-202ENST00000462276 SMYD1Q8NB12 490 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 POGLUT1Q8NBL1 392 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 PAQR8Q8TEZ7 354 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 TPD52L3Q96J77 140 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 ZNF347Q96SE7 839 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 POLR2J2Q9GZM3 115 aaKnown RBP9.8□□□□□ -0.84
RTF1-202ENST00000462276 POLR2J3Q9H1A7 115 aaKnown RBP9.8□□□□□ -0.84
RTF1-202ENST00000462276 RASSF4Q9H2L5 321 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 SH2D2AQ9NP31 389 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 TIMMDC1Q9NPL8 285 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 FBXO34Q9NWN3 711 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 GPR83Q9NYM4 423 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 FAM32AQ9Y421 112 aaKnown RBP9.8□□□□□ -0.84
RTF1-202ENST00000462276 AP4S1Q9Y587 144 aa9.8□□□□□ -0.84
RTF1-202ENST00000462276 PCDHGA9Q9Y5G4 932 aaKnown RBP9.8□□□□□ -0.84
RTF1-202ENST00000462276 PRAMEF25A6NGN4 478 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 TMEM229AB2RXF0 380 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 ZNF354AO60765 605 aaPredicted RBP9.79□□□□□ -0.84
RTF1-202ENST00000462276 ICOSLGO75144 302 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 ENTPD5O75356 428 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 OR6B1O95007 311 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 CSTAP01040 98 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 IFNW1P05000 195 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 MAGEA2P43356 314 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 SLC6A8P48029 635 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 CCL11P51671 97 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 SUMO3P55854 103 aaPredicted RBP9.79□□□□□ -0.84
RTF1-202ENST00000462276 FBXW4P57775 412 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 SMIM11AP58511 58 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 MAPK14Q16539 360 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 PDZK1Q5T2W1 519 aa9.79□□□□□ -0.84
RTF1-202ENST00000462276 B3GNTL1Q67FW5 361 aaPredicted RBP9.79□□□□□ -0.84
RTF1-202ENST00000462276 FCRLBQ6BAA4 426 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms