RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 WDR55Q9H6Y2 383 aaPredicted RBP6.32□□□□□ -1.4
CHEK2-220ENST00000454252 WDR41Q9HAD4 459 aa6.32□□□□□ -1.4
CHEK2-220ENST00000454252 EML4Q9HC35 981 aaKnown RBP6.32□□□□□ -1.4
CHEK2-220ENST00000454252 NPHS2Q9NP85 383 aa6.32□□□□□ -1.4
CHEK2-220ENST00000454252 ZNF701Q9NV72 531 aaPredicted RBP6.32□□□□□ -1.4
CHEK2-220ENST00000454252 ADGRE2Q9UHX3 823 aa6.32□□□□□ -1.4
CHEK2-220ENST00000454252 ZNF639Q9UID6 485 aa6.32□□□□□ -1.4
CHEK2-220ENST00000454252 DCTN4Q9UJW0 460 aa6.32□□□□□ -1.4
CHEK2-220ENST00000454252 CES1P1Q9UKY3 287 aa6.32□□□□□ -1.4
CHEK2-220ENST00000454252 LAMP3Q9UQV4 416 aa6.32□□□□□ -1.4
CHEK2-220ENST00000454252 DLGAP4Q9Y2H0 992 aa6.32□□□□□ -1.4
CHEK2-220ENST00000454252 TSC22D4Q9Y3Q8 395 aa6.32□□□□□ -1.4
CHEK2-220ENST00000454252 USH1CQ9Y6N9 552 aa6.32□□□□□ -1.4
CHEK2-220ENST00000454252 GOLGA8QA0A0J9YX86 632 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 SERTM1A2A2V5 107 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 GOLGA8OA6NCC3 632 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 FRG2CA6NGY1 282 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 GOLGA8NF8WBI6 632 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 H3BML4 177 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 HDAC3O15379 428 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 GPRIN2O60269 458 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 SNX3O60493 162 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 REM1O75628 298 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 SNUPNO95149 360 aaKnown RBP6.31□□□□□ -1.4
CHEK2-220ENST00000454252 OPN1LWP04000 364 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 CT45A8P0DMV1 189 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 CT45A9P0DMV2 189 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 PORP16435 677 aaPredicted RBP6.31□□□□□ -1.4
CHEK2-220ENST00000454252 PTNP21246 168 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 HMOX2P30519 316 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 ACVR1BP36896 505 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 ALDH9A1P49189 494 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 IDH3AP50213 366 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 BIKQ13323 160 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 CUL3Q13618 768 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 KIAA0040Q15053 153 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 GUSBP1Q15486 140 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 CLEC12BQ2HXU8 276 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 CT45A2Q5DJT8 189 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 XKR7Q5GH72 579 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 CCNYL2Q5T2Q4 361 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 RAET1LQ5VY80 246 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 FRG2Q64ET8 278 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 TMEM81Q6P7N7 255 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 AAGABQ6PD74 315 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 EPGNQ6UW88 154 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 RNF165Q6ZSG1 346 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 NUP54Q7Z3B4 507 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 COMMD6Q7Z4G1 85 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 TRIM46Q7Z4K8 759 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 ZNF619Q8N2I2 560 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 MEIOBQ8N635 442 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 OR9A2Q8NGT5 310 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 LILRB1Q8NHL6 650 aaPredicted RBP6.31□□□□□ -1.4
CHEK2-220ENST00000454252 TMEM171Q8WVE6 324 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 SELENOMQ8WWX9 145 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 AKAP1Q92667 903 aaKnown RBP eCLIP6.31□□□□□ -1.4
CHEK2-220ENST00000454252 KAT2AQ92830 837 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 KLHL29Q96CT2 875 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 CNRIP1Q96F85 164 aaPredicted RBP6.31□□□□□ -1.4
CHEK2-220ENST00000454252 PLPPR2Q96GM1 343 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 MAELQ96JY0 434 aaKnown RBP6.31□□□□□ -1.4
CHEK2-220ENST00000454252 COL21A1Q96P44 957 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 FRG2BQ96QU4 278 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 OR52B2Q96RD2 323 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 NPAS1Q99742 590 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 ACPTQ9BZG2 426 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 FAM107BQ9H098 131 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 DSN1Q9H410 356 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 RNF122Q9H9V4 155 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 MEAF6Q9HAF1 191 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 YAE1D1Q9NRH1 226 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 MED11Q9P086 117 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 STK38LQ9Y2H1 464 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 GPR55Q9Y2T6 319 aaPredicted RBP6.31□□□□□ -1.4
CHEK2-220ENST00000454252 ZNF337Q9Y3M9 751 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 PCDHGA11Q9Y5H2 935 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 PCDHA9Q9Y5H5 950 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 USF3Q68DE3 2245 aa6.31□□□□□ -1.4
CHEK2-220ENST00000454252 ARID1AO14497 2285 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 NPIPB8E9PQR5 432 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 FOXE1O00358 373 aaPredicted RBP6.3□□□□□ -1.4
CHEK2-220ENST00000454252 HS3ST1O14792 307 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 ACOX3O15254 700 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 CLOCKO15516 846 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 PHF1O43189 567 aaPredicted RBP6.3□□□□□ -1.4
CHEK2-220ENST00000454252 EMC8O43402 210 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 TSPAN2O60636 221 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 ADAM11O75078 769 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 ULK1O75385 1050 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 CRCPO75575 148 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 FAM107AO95990 144 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 IGHV4-39P01824 125 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 KRT6AP02538 564 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 KRT6BP04259 564 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 ATP1B1P05026 303 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 C8BP07358 591 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 PAX1P15863 534 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 NAGAP17050 411 aa6.3□□□□□ -1.4
CHEK2-220ENST00000454252 HK1P19367 917 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms