RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 RNF144AP50876 292 aaPredicted RBP17.94■□□□□ 0.46
SGCE-207ENST00000447873 SOX8P57073 446 aa17.94■□□□□ 0.46
SGCE-207ENST00000447873 NTRK2Q16620 822 aa17.94■□□□□ 0.46
SGCE-207ENST00000447873 EIPR1Q53HC9 387 aa17.94■□□□□ 0.46
SGCE-207ENST00000447873 ABHD17BQ5VST6 288 aa17.94■□□□□ 0.46
SGCE-207ENST00000447873 IL20RBQ6UXL0 311 aa17.94■□□□□ 0.46
SGCE-207ENST00000447873 DND1Q8IYX4 353 aaKnown RBP17.94■□□□□ 0.46
SGCE-207ENST00000447873 GEMIN6Q8WXD5 167 aaKnown RBP17.94■□□□□ 0.46
SGCE-207ENST00000447873 TTC9Q92623 222 aa17.94■□□□□ 0.46
SGCE-207ENST00000447873 CHID1Q9BWS9 393 aa17.94■□□□□ 0.46
SGCE-207ENST00000447873 RLIMQ9NVW2 624 aa17.94■□□□□ 0.46
SGCE-207ENST00000447873 STMN3Q9NZ72 180 aa17.94■□□□□ 0.46
SGCE-207ENST00000447873 SERINC4A6NH21 518 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 H0Y3Z8 333 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 SYT5O00445 386 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 MGRN1O60291 552 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 DNAJB5O75953 348 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 LGI1O95970 557 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 NGFRP08138 427 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 OR1E2P47887 323 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 EEF1A1P68104 462 aaKnown RBP17.93■□□□□ 0.46
SGCE-207ENST00000447873 FGFBP1Q14512 234 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 ZNF791Q3KP31 576 aaPredicted RBP17.93■□□□□ 0.46
SGCE-207ENST00000447873 MRPL2Q5T653 305 aaKnown RBP17.93■□□□□ 0.46
SGCE-207ENST00000447873 RNF220Q5VTB9 566 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 BROXQ5VW32 411 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 BEST3Q8N1M1 668 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 CLIP4Q8N3C7 705 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 HGDQ93099 445 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 TBL1XR1Q9BZK7 514 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 ARMC1Q9NVT9 282 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 HPF1Q9NWY4 346 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 ABI3Q9P2A4 366 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 SLC9A8Q9Y2E8 581 aa17.93■□□□□ 0.46
SGCE-207ENST00000447873 URB1O60287 2271 aaKnown RBP17.93■□□□□ 0.46
SGCE-207ENST00000447873 CPAMD8Q8IZJ3 1885 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 CDHR4A6H8M9 788 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 H3BNH8 94 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 TP53I11O14683 189 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 MT-ND1P03886 318 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 CAPNS1P04632 268 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 TNFRSF1BP20333 461 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 EVI2BP34910 448 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 LRRC69Q6ZNQ3 347 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 COMTD1Q86VU5 262 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 PAPD5Q8NDF8 572 aaKnown RBP17.92■□□□□ 0.46
SGCE-207ENST00000447873 OR10G3Q8NGC4 313 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 YY1AP1Q9H869 796 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 GPR83Q9NYM4 423 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 ABCG2Q9UNQ0 655 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 CHST2Q9Y4C5 530 aa17.92■□□□□ 0.46
SGCE-207ENST00000447873 H3BNX3 289 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 EPPINO95925 133 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 SEMG1P04279 462 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 IFNW1P05000 195 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 FABP3P05413 133 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 CLK3P49761 638 aaKnown RBP17.91■□□□□ 0.46
SGCE-207ENST00000447873 KCNC4Q03721 635 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 RIPK1Q13546 671 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 RAPSNQ13702 412 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 RCN1Q15293 331 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 ZSWIM7Q19AV6 140 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 AGAP7PQ5VUJ5 663 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 CARM1Q86X55 608 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 ZDHHC21Q8IVQ6 265 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 CMIPQ8IY22 773 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 POGLUT1Q8NBL1 392 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 VANGL1Q8TAA9 524 aaPredicted RBP17.91■□□□□ 0.46
SGCE-207ENST00000447873 AGAP4Q96P64 663 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 NODALQ96S42 347 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 DCLRE1BQ9H816 532 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 IL1RAPQ9NPH3 570 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 SLC35A3Q9Y2D2 325 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 ALG1L2C9J202 215 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 hCG_2039718K7EN88 272 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 M0R3H8 397 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 HNRNPRO43390 633 aaKnown RBP17.91■□□□□ 0.46
SGCE-207ENST00000447873 FADS1O60427 444 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 CSTAP01040 98 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 CCL11P51671 97 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 RPP38P78345 283 aaKnown RBP17.91■□□□□ 0.46
SGCE-207ENST00000447873 TLE3Q04726 772 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 ZNF468Q5VIY5 522 aaPredicted RBP17.91■□□□□ 0.46
SGCE-207ENST00000447873 APOOLQ6UXV4 268 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 LINC00696Q6ZRV3 163 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 GATSQ8NAP1 163 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 PHOSPHO1Q8TCT1 267 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 GRHL3Q8TE85 626 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 APOBEC4Q8WW27 367 aaKnown RBP17.91■□□□□ 0.46
SGCE-207ENST00000447873 C7orf34Q96L11 122 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 ARHGDIGQ99819 225 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 ANKRD10Q9NXR5 420 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 RAXQ9Y2V3 346 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 KCNMB2Q9Y691 235 aa17.91■□□□□ 0.46
SGCE-207ENST00000447873 IGF2RP11717 2491 aa17.9■□□□□ 0.46
SGCE-207ENST00000447873 A0A1W2PQD3 144 aa17.9■□□□□ 0.46
SGCE-207ENST00000447873 MED19A0JLT2 244 aaPredicted RBP17.9■□□□□ 0.46
SGCE-207ENST00000447873 C1QTNF9BB2RNN3 333 aa17.9■□□□□ 0.46
SGCE-207ENST00000447873 GTPBP1O00178 669 aaKnown RBP17.9■□□□□ 0.46
SGCE-207ENST00000447873 FRS3O43559 492 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms