RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 COG8Q96MW5 612 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 DPYSL5Q9BPU6 564 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 COPS4Q9BT78 406 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 DCUN1D5Q9BTE7 237 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 DUSP23Q9BVJ7 150 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 ITPAQ9BY32 194 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 PLA2G12AQ9BZM1 189 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 SERTAD3Q9UJW9 196 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 GMEB2Q9UKD1 530 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 A0A1W2PQM1 296 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 TRMUO75648 421 aaKnown RBP15.44■□□□□ 0.06
USHBP1-203ENST00000431146 CLPSP04118 112 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 CT45A8P0DMV1 189 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 CT45A9P0DMV2 189 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 ITIH1P19827 911 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 NR4A1P22736 598 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 GCGRP47871 477 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 EMP3P54852 163 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 ALDH6A1Q02252 535 aaKnown RBP15.44■□□□□ 0.06
USHBP1-203ENST00000431146 FUT7Q11130 342 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 LPAL2Q16609 132 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 CT45A2Q5DJT8 189 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 RRM2BQ7LG56 351 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 BCDIN3DQ7Z5W3 292 aaKnown RBP15.44■□□□□ 0.06
USHBP1-203ENST00000431146 IQCF2Q8IXL9 164 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 PTPMT1Q8WUK0 201 aaPredicted RBP15.44■□□□□ 0.06
USHBP1-203ENST00000431146 LMF1Q96S06 567 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 ZNF768Q9H5H4 540 aaKnown RBP15.44■□□□□ 0.06
USHBP1-203ENST00000431146 PSORS1C1Q9UIG5 152 aa15.44■□□□□ 0.06
USHBP1-203ENST00000431146 RPLP0P05388 317 aaKnown RBP15.43■□□□□ 0.06
USHBP1-203ENST00000431146 FBLP22087 321 aaKnown RBP15.43■□□□□ 0.06
USHBP1-203ENST00000431146 IFNA8P32881 189 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 GPR4P46093 362 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 OCA2Q04671 838 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 LSAMPQ13449 338 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 TMEM71Q6P5X7 295 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 NRMQ8IXM6 262 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 AMER2Q8N7J2 671 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 ZNF615Q8N8J6 731 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 CNOT9Q92600 299 aaKnown RBP15.43■□□□□ 0.06
USHBP1-203ENST00000431146 ZNF304Q9HCX3 659 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 CLCA1A8K7I4 914 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 ZNF99A8MXY4 864 aaPredicted RBP15.43■□□□□ 0.06
USHBP1-203ENST00000431146 SERTAD2Q14140 314 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 ARHGAP40Q5TG30 622 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 SLX4IPQ5VYV7 408 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 PRSS48Q7RTY5 328 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 LAPTM4BQ86VI4 370 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 RANBP3LQ86VV4 465 aaPredicted RBP15.43■□□□□ 0.06
USHBP1-203ENST00000431146 TMEM151BQ8IW70 566 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 CACTIN-AS1Q8N1I8 211 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 LINC00471Q8N535 108 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 TMEM105Q8N8V8 129 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 IPCEF1Q8WWN9 437 aaPredicted RBP15.43■□□□□ 0.06
USHBP1-203ENST00000431146 SENP5Q96HI0 755 aaPredicted RBP15.43■□□□□ 0.06
USHBP1-203ENST00000431146 CCNB1IP1Q9NPC3 277 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 TVP23BQ9NYZ1 205 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 OR10H1Q9Y4A9 318 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 PCDHGB1Q9Y5G3 927 aa15.43■□□□□ 0.06
USHBP1-203ENST00000431146 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.42■□□□□ 0.06
USHBP1-203ENST00000431146 A0A1B0GVG6 124 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 ADAM11O75078 769 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 OR5F1O95221 314 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 LCKP06239 509 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 STSP08842 583 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 OMPP47874 163 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 DSG2Q14126 1118 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 GINS1Q14691 196 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 OR1Q1Q15612 314 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 C12orf73Q69YU5 71 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 ACSM5Q6NUN0 579 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 WDR88Q6ZMY6 472 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 SHISA6Q6ZSJ9 500 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 B3GNT7Q8NFL0 401 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 ACOT11Q8WXI4 607 aaPredicted RBP15.42■□□□□ 0.06
USHBP1-203ENST00000431146 RORBQ92753 470 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 MVB12AQ96EY5 273 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 SIGLEC11Q96RL6 698 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 FUNDC2Q9BWH2 189 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 OR8D2Q9GZM6 311 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 Q9N2J8 555 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 ACOT13Q9NPJ3 140 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 PLCXD1Q9NUJ7 323 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 DNAJC27Q9NZQ0 273 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 NUP210LQ5VU65 1888 aa15.42■□□□□ 0.06
USHBP1-203ENST00000431146 A0A1B0GX78 115 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 DSCR3O14972 297 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 ENTPD6O75354 484 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 PSMB9P28065 219 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 COX10Q12887 443 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 TUBA3CQ13748 450 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 CASP12Q6UXS9 341 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 CD300LDQ6UXZ3 194 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 KMT5CQ86Y97 462 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 BCORP1Q8N888 145 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 TCEANCQ8N8B7 351 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 ZNF420Q8TAQ5 688 aaPredicted RBP15.41■□□□□ 0.06
USHBP1-203ENST00000431146 PIGXQ8TBF5 258 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 GNPDA2Q8TDQ7 276 aa15.41■□□□□ 0.06
USHBP1-203ENST00000431146 NR4A3Q92570 626 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms