RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 CHST10O43529 356 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 PIP5K1CO60331 668 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 IL1AP01583 271 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 THY1P04216 161 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 SOX18P35713 384 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 ZNF155Q12901 538 aaPredicted RBP12.73□□□□□ -0.37
THBS3-202ENST00000428962 DSG2Q14126 1118 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 MRPL2Q5T653 305 aaKnown RBP12.73□□□□□ -0.37
THBS3-202ENST00000428962 AADACL4Q5VUY2 407 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 NXNL2Q5VZ03 156 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 STEAP3Q658P3 488 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 GID4Q8IVV7 300 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 TMEFF1Q8IYR6 380 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 POC5Q8NA72 575 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 AVL9Q8NBF6 648 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 SIMC1Q8NDZ2 872 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 BRIX1Q8TDN6 353 aaKnown RBP12.73□□□□□ -0.37
THBS3-202ENST00000428962 HLA-CQ95604 372 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 TOE1Q96GM8 510 aaKnown RBP12.73□□□□□ -0.37
THBS3-202ENST00000428962 GPR27Q9NS67 375 aa12.73□□□□□ -0.37
THBS3-202ENST00000428962 H2AFY2Q9P0M6 372 aaPredicted RBP12.73□□□□□ -0.37
THBS3-202ENST00000428962 GOLGA4Q13439 2230 aaKnown RBP12.72□□□□□ -0.37
THBS3-202ENST00000428962 IQCMA0A1B0GVH7 501 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 C2CD4DB7Z1M9 353 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 OR10H2O60403 315 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 BRINP1O60477 761 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 SLC35E2P0CK97 266 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 HTR1FP30939 366 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 RPS19P39019 145 aaKnown RBP12.72□□□□□ -0.37
THBS3-202ENST00000428962 GCGRP47871 477 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 TPBGQ13641 420 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 FZD2Q14332 565 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 PLK5Q496M5 336 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 PARGQ86W56 976 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 CDK20Q8IZL9 346 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 VWA5B2Q8N398 1253 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 PSD4Q8NDX1 1056 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 TMEM52Q8NDY8 209 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 OR5T3Q8NGG3 340 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 FANK1Q8TC84 345 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 ZDHHC1Q8WTX9 485 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 CTHRC1Q96CG8 243 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 TXNL4BQ9NX01 149 aaKnown RBP12.72□□□□□ -0.37
THBS3-202ENST00000428962 CYP8B1Q9UNU6 501 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 CARD8Q9Y2G2 431 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 CENPVL1A0A0U1RR11 272 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 BLACEA4D250 179 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 SGK494L7N484 410 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 GUSBP08236 651 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 GABRA5P31644 462 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 GABRA3P34903 492 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 MAP3K8P41279 467 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 SLC1A3P43003 542 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 OR1Q1Q15612 314 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 ZNHIT3Q15649 155 aaPredicted RBP12.72□□□□□ -0.37
THBS3-202ENST00000428962 MAPK14Q16539 360 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 KLHL36Q8N4N3 616 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 C19orf47Q8N9M1 422 aaKnown RBP12.72□□□□□ -0.37
THBS3-202ENST00000428962 ADAMTS18Q8TE60 1221 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 TMEM239Q8WW34 195 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 SLC25A46Q96AG3 418 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 ANKRD9Q96BM1 317 aaPredicted RBP12.72□□□□□ -0.37
THBS3-202ENST00000428962 KCTD7Q96MP8 289 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 WDFY2Q96P53 400 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 CD180Q99467 661 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 ZNF559Q9BR84 538 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 ARHGAP9Q9BRR9 750 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 MED18Q9BUE0 208 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 JAM3Q9BX67 310 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 COL25A1Q9BXS0 654 aaPredicted RBP12.72□□□□□ -0.37
THBS3-202ENST00000428962 FN3KQ9H479 309 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 POLE4Q9NR33 117 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 SNTG1Q9NSN8 517 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 TRAPPC4Q9Y296 219 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 EXOGQ9Y2C4 368 aaKnown RBP12.72□□□□□ -0.37
THBS3-202ENST00000428962 GSTK1Q9Y2Q3 226 aa12.72□□□□□ -0.37
THBS3-202ENST00000428962 WWP2O00308 870 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 RGS5O15539 181 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 AKAP8O43823 692 aaKnown RBP12.71□□□□□ -0.38
THBS3-202ENST00000428962 RDH16O75452 317 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 NKX2-2O95096 273 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 NTN1O95631 604 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 CH25HO95992 272 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 APOA1P02647 267 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 CELA2BP08218 269 aaPredicted RBP12.71□□□□□ -0.38
THBS3-202ENST00000428962 BMP7P18075 431 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 HTR2AP28223 471 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 SEPHS1P49903 392 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 MGAT2Q10469 447 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 EXOSC7Q15024 291 aaKnown RBP12.71□□□□□ -0.38
THBS3-202ENST00000428962 ZNF542PQ5EBM4 170 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 ARMC4Q5T2S8 1044 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 OR2G6Q5TZ20 316 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 ZNF613Q6PF04 617 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 QSOX2Q6ZRP7 698 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 AP3S1Q92572 193 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 HOXB13Q92826 284 aaPredicted RBP12.71□□□□□ -0.38
THBS3-202ENST00000428962 TRMT61AQ96FX7 289 aaKnown RBP12.71□□□□□ -0.38
THBS3-202ENST00000428962 KLHDC7BQ96G42 594 aa12.71□□□□□ -0.38
THBS3-202ENST00000428962 SAMD8Q96LT4 415 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms