RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 GSX1Q9H4S2 264 aaPredicted RBP15.36■□□□□ 0.05
TRIM39-209ENST00000428728 NEUROD4Q9HD90 331 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 DLL4Q9NR61 685 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 GIMAP2Q9UG22 337 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 AP4B1Q9Y6B7 739 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 ZFHX3Q15911 3703 aa15.36■□□□□ 0.05
TRIM39-209ENST00000428728 ALG1L2C9J202 215 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 PIP5K1BO14986 540 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 CTIFO43310 598 aaKnown RBP15.35■□□□□ 0.05
TRIM39-209ENST00000428728 EMC8O43402 210 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 TBX19O60806 448 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 KCNK2O95069 426 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 FCGR2AP12318 317 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 ALDH3A1P30838 453 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 UGT2B10P36537 528 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 HPCAL1P37235 193 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 MAP3K8P41279 467 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 FRKP42685 505 aaPredicted RBP15.35■□□□□ 0.05
TRIM39-209ENST00000428728 ASMTP46597 345 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 TMEM44Q2T9K0 475 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 GLYR1Q49A26 553 aaPredicted RBP15.35■□□□□ 0.05
TRIM39-209ENST00000428728 CCNJQ5T5M9 372 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 RNF165Q6ZSG1 346 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 COX18Q8N8Q8 333 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 TRIM44Q96DX7 344 aaPredicted RBP15.35■□□□□ 0.05
TRIM39-209ENST00000428728 PIK3IP1Q96FE7 263 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 C16orf58Q96GQ5 468 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 NPAS1Q99742 590 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 PRRG4Q9BZD6 226 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 ACSS1Q9NUB1 689 aaPredicted RBP15.35■□□□□ 0.05
TRIM39-209ENST00000428728 FBXO34Q9NWN3 711 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 ZNF226Q9NYT6 803 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 CLEC4AQ9UMR7 237 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 PROCRQ9UNN8 238 aa15.35■□□□□ 0.05
TRIM39-209ENST00000428728 DEFB108AA8MXU0 73 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 CGAP01215 116 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 OPN1LWP04000 364 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 ALOX5P09917 674 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 BCKDHAP12694 445 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 HPGDP15428 266 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 ZNF17P17021 662 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 SLC6A8P48029 635 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 ZNF41P51814 821 aaPredicted RBP15.34■□□□□ 0.05
TRIM39-209ENST00000428728 EXOC3L2Q2M3D2 409 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 ZCCHC23Q6ZST2 131 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 ZNF610Q8N9Z0 462 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 RNF145Q96MT1 663 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 SLC39A3Q9BRY0 314 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 KLHL4Q9C0H6 718 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 TMEM185BQ9H7F4 350 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 UBTD1Q9HAC8 227 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 ZCCHC3Q9NUD5 404 aaKnown RBP15.34■□□□□ 0.05
TRIM39-209ENST00000428728 BEX4Q9NWD9 120 aaPredicted RBP15.34■□□□□ 0.05
TRIM39-209ENST00000428728 MKS1Q9NXB0 559 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 NTMQ9P121 344 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 SLC17A7Q9P2U7 560 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 TMED5Q9Y3A6 229 aa15.34■□□□□ 0.05
TRIM39-209ENST00000428728 ARID1AO14497 2285 aa15.33■□□□□ 0.05
TRIM39-209ENST00000428728 SCAMP2O15127 329 aaKnown RBP15.33■□□□□ 0.04
TRIM39-209ENST00000428728 NPHS1O60500 1241 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 SPAG7O75391 227 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 PLGP00747 810 aaPredicted RBP15.33■□□□□ 0.04
TRIM39-209ENST00000428728 NGFRP08138 427 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 CD8BP10966 210 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 TBXA2RP21731 343 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 CRYGSP22914 178 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 PRIM2P49643 509 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 RNF144AP50876 292 aaPredicted RBP15.33■□□□□ 0.04
TRIM39-209ENST00000428728 FGFBP1Q14512 234 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 LASP1Q14847 261 aaKnown RBP15.33■□□□□ 0.04
TRIM39-209ENST00000428728 GUSBP1Q15486 140 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.33■□□□□ 0.04
TRIM39-209ENST00000428728 PLPPR5Q32ZL2 321 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 ARL13AQ5H913 290 aaPredicted RBP15.33■□□□□ 0.04
TRIM39-209ENST00000428728 ANKRD34AQ69YU3 496 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 FAM214BQ7L5A3 538 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 R3HCC1LQ7Z5L2 792 aaKnown RBP15.33■□□□□ 0.04
TRIM39-209ENST00000428728 TRABD2AQ86V40 505 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 KRTAP1-3Q8IUG1 177 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 BANPQ8N9N5 519 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 OR7A2PQ8NGA2 310 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 OR6Y1Q8NGX8 325 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 OR10D3Q8NH80 312 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 MTERF3Q96E29 417 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 FAM120BQ96EK7 910 aaKnown RBP15.33■□□□□ 0.04
TRIM39-209ENST00000428728 KLHDC3Q9BQ90 382 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 C1orf50Q9BV19 199 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 SIRT3Q9NTG7 399 aaPredicted RBP15.33■□□□□ 0.04
TRIM39-209ENST00000428728 ELOVL5Q9NYP7 299 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 STOML1Q9UBI4 398 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 TRAF6Q9Y4K3 522 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 SNX8Q9Y5X2 465 aa15.33■□□□□ 0.04
TRIM39-209ENST00000428728 A0A087WZY1 265 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 A0A1W2PRB8 838 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 TMEM114B3SHH9 223 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 C16orf97H3BN30 126 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 SCDO00767 359 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 TNFSF11O14788 317 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 CXCL13O43927 109 aa15.32■□□□□ 0.04
TRIM39-209ENST00000428728 PEX11AO75192 247 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms