RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ADGRB3O60242 1522 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 ATP7AQ04656 1500 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 ARAP3Q8WWN8 1544 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 TROQ12816 1431 aaPredicted RBP2.66□□□□□ -1.98
LINC01040-201ENST00000425048 TRAPPC8Q9Y2L5 1435 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 ABCC4O15439 1325 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 A2MP01023 1474 aa2.65□□□□□ -1.98
LINC01040-201ENST00000425048 ZNF518AQ6AHZ1 1483 aa2.65□□□□□ -1.98
LINC01040-201ENST00000425048 CDK5RAP2Q96SN8 1893 aa2.65□□□□□ -1.98
LINC01040-201ENST00000425048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 IGLV8-61A0A075B6I0 122 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 ARPC4-TTLL3A0A0A6YYG9 625 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 E9PMD0 336 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 ZW10O43264 779 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 AQP9O43315 295 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 FCGR3BO75015 233 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 CSO75390 466 aaKnown RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 CLN5O75503 358 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 KLHL2O95198 593 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 STAMBPO95630 424 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 CRYZL1O95825 349 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 ANKRD34CP0C6C1 535 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 UBTFL6P0CB48 400 aaPredicted RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 IL32P24001 234 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 PSMB4P28070 264 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 CASP14P31944 242 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 EVI2BP34910 448 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 HSD17B2P37059 387 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 HSPA9P38646 679 aaKnown RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 GSSP48637 474 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 TMED10P49755 219 aaKnown RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 NT5C2P49902 561 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 MFAP2P55001 183 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 KRT83P78385 493 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 IFITM2Q01629 132 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 KCTD2Q14681 263 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 MOGQ16653 247 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 KCTD19Q17RG1 926 aaPredicted RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 KLHL38Q2WGJ6 581 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 FAM133BQ5BKY9 247 aaKnown RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 KRT80Q6KB66 452 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 C4orf22Q6V702 233 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 ABI3BPQ7Z7G0 1075 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 GLRX5Q86SX6 157 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 ITIH5Q86UX2 942 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 CLVS1Q8IUQ0 354 aaPredicted RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 MMAAQ8IVH4 418 aaKnown RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 RIBC1Q8N443 379 aaPredicted RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 KIF2BQ8N4N8 673 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 ARL6IP6Q8N6S5 226 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 LILRB4Q8NHJ6 448 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 ANGPTL6Q8NI99 470 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 PYROXD1Q8WU10 500 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 TFB1MQ8WVM0 346 aaKnown RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 CRYGNQ8WXF5 182 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 TLCD1Q96CP7 247 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 SNRNP40Q96DI7 357 aaKnown RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 TMA16Q96EY4 203 aaKnown RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 PGAP3Q96FM1 320 aaPredicted RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 IFT74Q96LB3 600 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 CCDC43Q96MW1 224 aaKnown RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 DHRS9Q9BPW9 319 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 DDX50Q9BQ39 737 aaKnown RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 SLC25A23Q9BV35 468 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 SHCBP1LQ9BZQ2 653 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 KRT23Q9C075 422 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 ABCG4Q9H172 646 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 EHD1Q9H4M9 534 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 RNF41Q9H4P4 317 aaPredicted RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 LZTFL1Q9NQ48 299 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 GDF3Q9NR23 364 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 ARMC1Q9NVT9 282 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 EIF3KQ9UBQ5 218 aaKnown RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 SEC14L4Q9UDX3 406 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 CFDP1Q9UEE9 299 aaPredicted RBP2.65□□□□□ -1.99
LINC01040-201ENST00000425048 USH1CQ9Y6N9 552 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 MYH3P11055 1940 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 TTC37Q6PGP7 1564 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 ERVK-7P63135 1459 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 MLH3Q9UHC1 1453 aa2.65□□□□□ -1.99
LINC01040-201ENST00000425048 ANKRD36CQ5JPF3 1778 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 PTPRFP10586 1907 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 IGKV2-28A0A075B6P5 120 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 IGKV2D-24A0A075B6R9 120 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 SYNDIG1LA6NDD5 238 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 TRABD2BA6NFA1 517 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 GOLGA8MH3BSY2 632 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 HIP1O00291 1037 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 PFDN6O15212 129 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 ALOX15BO15296 676 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 NDUFA2O43678 99 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 NUDT21O43809 227 aaKnown RBP2.64□□□□□ -1.99
LINC01040-201ENST00000425048 IGKV2D-28P01615 120 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 SHBGP04278 402 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 S100A6P06703 90 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 MMP10P09238 476 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 ZNF18P17022 549 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 PRKACAP17612 351 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 M6PRP20645 277 aa2.64□□□□□ -1.99
LINC01040-201ENST00000425048 HNRNPA2B1P22626 353 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms