RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 TRIM13O60858 407 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 OXSR1O95747 527 aaPredicted RBP15.6■□□□□ 0.09
MSH6-203ENST00000420813 DDX5P17844 614 aaKnown RBP15.6■□□□□ 0.09
MSH6-203ENST00000420813 ASMTP46597 345 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 MANFP55145 182 aaKnown RBP15.6■□□□□ 0.09
MSH6-203ENST00000420813 NKX6-1P78426 367 aaPredicted RBP15.6■□□□□ 0.09
MSH6-203ENST00000420813 PCLAFQ15004 111 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 SGCBQ16585 318 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 RFTN2Q52LD8 501 aaPredicted RBP15.6■□□□□ 0.09
MSH6-203ENST00000420813 KANK2Q63ZY3 851 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 C10orf107Q8IVU9 208 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 LRRC75A-AS1Q8N1F1 130 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 FAM110BQ8TC76 370 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 CAVIN3Q969G5 261 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 GIMAP5Q96F15 307 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 C18orf12Q96KH6 178 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 TSSK3Q96PN8 268 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 GATA5Q9BWX5 397 aaPredicted RBP15.6■□□□□ 0.09
MSH6-203ENST00000420813 TUBB1Q9H4B7 451 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 GSX1Q9H4S2 264 aaPredicted RBP15.6■□□□□ 0.09
MSH6-203ENST00000420813 MKS1Q9NXB0 559 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 SH3BP4Q9P0V3 963 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 PROCRQ9UNN8 238 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 VDAC3Q9Y277 283 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 SMIM23A6NLE4 172 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 LSM1O15116 133 aaKnown RBP15.59■□□□□ 0.09
MSH6-203ENST00000420813 AKAP10O43572 662 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 AQP8O94778 261 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 HSPA4LO95757 839 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 ACP2P11117 423 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 TBXA2RP21731 343 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 KCNJ5P48544 419 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 PRKAG1P54619 331 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 RPL38P63173 70 aaKnown RBP15.59■□□□□ 0.09
MSH6-203ENST00000420813 MFSD12Q6NUT3 480 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 EXOC3L1Q86VI1 746 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 MISPQ8IVT2 679 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 WDR75Q8IWA0 830 aaKnown RBP15.59■□□□□ 0.09
MSH6-203ENST00000420813 C4orf33Q8N1A6 199 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 GTPBP8Q8N3Z3 284 aaPredicted RBP15.59■□□□□ 0.09
MSH6-203ENST00000420813 ZNF610Q8N9Z0 462 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 OR4C3Q8NH37 302 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 ACTRT2Q8TDY3 377 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 EPS8L3Q8TE67 593 aaKnown RBP15.59■□□□□ 0.09
MSH6-203ENST00000420813 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.59■□□□□ 0.09
MSH6-203ENST00000420813 SLC9A6Q92581 669 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 PIGTQ969N2 578 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 ZBTB8AQ96BR9 441 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 EMC9Q9Y3B6 208 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 DNAJC15Q9Y5T4 150 aa15.59■□□□□ 0.09
MSH6-203ENST00000420813 A0A1W2PQD3 144 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 SHISA8B8ZZ34 492 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 EIF1AYO14602 144 aaKnown RBP15.58■□□□□ 0.08
MSH6-203ENST00000420813 ARHGEF9O43307 516 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 KCNK2O95069 426 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 FGF4P08620 206 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 ALOX5P09917 674 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 LINC00032P0C843 101 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 FPR1P21462 350 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 EIF1AXP47813 144 aaKnown RBP15.58■□□□□ 0.08
MSH6-203ENST00000420813 SERPINB4P48594 390 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 MLC1Q15049 377 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 DUSP5Q16690 384 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 EXOSC6Q5RKV6 272 aaKnown RBP15.58■□□□□ 0.08
MSH6-203ENST00000420813 LRIG3Q6UXM1 1119 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 SZRD1Q7Z422 152 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 R3HCC1LQ7Z5L2 792 aaKnown RBP15.58■□□□□ 0.08
MSH6-203ENST00000420813 SLC16A11Q8NCK7 471 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 OR6K3Q8NGY3 331 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 PIK3IP1Q96FE7 263 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 GMPPAQ96IJ6 420 aaPredicted RBP15.58■□□□□ 0.08
MSH6-203ENST00000420813 ADGRG7Q96K78 797 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 MARK4Q96L34 752 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 PRRG4Q9BZD6 226 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 PLSCR4Q9NRQ2 329 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 UBQLN4Q9NRR5 601 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 BAIAP2L1Q9UHR4 511 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 FIS1Q9Y3D6 152 aa15.58■□□□□ 0.08
MSH6-203ENST00000420813 ADAMDEC1O15204 470 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 GMFGO60234 142 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 NPHS1O60500 1241 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 HPGDP15428 266 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 PPP3CBP16298 524 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 IL11P20809 199 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 PSMA4P25789 261 aaKnown RBP15.57■□□□□ 0.08
MSH6-203ENST00000420813 PRIM2P49643 509 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 ZNF41P51814 821 aaPredicted RBP15.57■□□□□ 0.08
MSH6-203ENST00000420813 RAC1P63000 192 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 ACKR1Q16570 336 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 CTU2Q2VPK5 515 aaKnown RBP15.57■□□□□ 0.08
MSH6-203ENST00000420813 PLPPR5Q32ZL2 321 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 FIGNL1Q6PIW4 674 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 C20orf204Q6ZNR8 217 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 ZNF550Q7Z398 422 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 GALNT10Q86SR1 603 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 COX18Q8N8Q8 333 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 LRRN4CLQ8ND94 238 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 OR10D3Q8NH80 312 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 CLHC1Q8NHS4 586 aa15.57■□□□□ 0.08
MSH6-203ENST00000420813 TWIST2Q8WVJ9 160 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms