RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 MZT2BQ6NZ67 158 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 TMEM64Q6YI46 380 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 MAVSQ7Z434 540 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 GALNT5Q7Z7M9 940 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 CCDC71Q8IV32 467 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 SLITRK4Q8IW52 837 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 PHC2Q8IXK0 858 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF619Q8N2I2 560 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 RCBTB1Q8NDN9 531 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 CTRCQ99895 268 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF559Q9BR84 538 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 KCNN2Q9H2S1 579 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 LDAHQ9H6V9 325 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 KAT8Q9H7Z6 458 aaKnown RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 LRFN1Q9P244 771 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 ING4Q9UNL4 249 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 SLC35A3Q9Y2D2 325 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 COL4A6Q14031 1691 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 PSMA1P25786 263 aaKnown RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 ELOAQ14241 798 aaKnown RBP7.98□□□□□ -1.13
SYNE1-211ENST00000413186 EXT1Q16394 746 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 GUK1Q16774 197 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 NDUFAF6Q330K2 333 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 SATL1Q86VE3 508 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 AMDHD1Q96NU7 426 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 PIP5K1AQ99755 562 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 IFT27Q9BW83 186 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 RACGAP1Q9H0H5 632 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 GORASP2Q9H8Y8 452 aa7.98□□□□□ -1.13
SYNE1-211ENST00000413186 KCNE1BA0A087WTH5 132 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 LOC105369274A0A096LPK9 316 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 LOC102723532A0A0G2JNH3 316 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 CPSF4LA6NMK7 179 aaKnown RBP7.97□□□□□ -1.13
SYNE1-211ENST00000413186 CYP4B1P13584 511 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 PNLIPP16233 465 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 FABP6P51161 128 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 UBE2IP63279 158 aaKnown RBP7.97□□□□□ -1.13
SYNE1-211ENST00000413186 DSG2Q14126 1118 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 ERV3-1Q14264 604 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 KCNAB1Q14722 419 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 LCN1P1Q5VSP4 162 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 FAM180BQ6P0A1 224 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 TMPRSS11AQ6ZMR5 421 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 GTF2H5Q6ZYL4 71 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 OR4N4Q8N0Y3 316 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 LINC01555Q8NAE3 123 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 DOK4Q8TEW6 326 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 TAAR9Q96RI9 348 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 PINK1Q9BXM7 581 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 FAAHO00519 579 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 NOS1APO75052 506 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-211ENST00000413186 CSO75390 466 aaKnown RBP7.97□□□□□ -1.13
SYNE1-211ENST00000413186 MT-CO3P00414 261 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 NELFEP18615 380 aaKnown RBP7.97□□□□□ -1.13
SYNE1-211ENST00000413186 AHCYP23526 432 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 NADK2Q4G0N4 442 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 WDR74Q6RFH5 385 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-211ENST00000413186 SPRED1Q7Z699 444 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 UCK2Q9BZX2 261 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 PILRBQ9UKJ0 227 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 CBLCQ9ULV8 474 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 PRAMEF33A0A0G2JMD5 474 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 TRBV11-1A0A0K0K1C0 115 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 SERTM1A2A2V5 107 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 RRP8O43159 456 aaKnown RBP7.97□□□□□ -1.13
SYNE1-211ENST00000413186 RENP00797 406 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 BSGP35613 385 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 PER3P56645 1201 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 GABARAPL2P60520 117 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 DCST2Q5T1A1 773 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF425Q6IV72 752 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 SKA3Q8IX90 412 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 SLC25A36Q96CQ1 311 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 GLIPR2Q9H4G4 154 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 TIGARQ9NQ88 270 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 ALKBH4Q9NXW9 302 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 CBY1Q9Y3M2 126 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF726A6NNF4 738 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 LILRB5O75023 590 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 SCGB2A1O75556 95 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 CELA2BP08218 269 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-211ENST00000413186 ARAFP10398 606 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 ZNF3P17036 446 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 CDK2P24941 298 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 SLC14A1Q13336 389 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 C6orf183Q5T699 404 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 RPL13AP3Q6NVV1 102 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 DNM1P34Q6PK57 102 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 NAXDQ8IW45 347 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 COQ8BQ96D53 544 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 NEURL3Q96EH8 262 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 OR7D2Q96RA2 312 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 NUDT22Q9BRQ3 303 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 TMED9Q9BVK6 235 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 UBQLN4Q9NRR5 601 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 ETAA1Q9NY74 926 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 DOCK6Q96HP0 2047 aa7.97□□□□□ -1.13
SYNE1-211ENST00000413186 H7C2Y5 167 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 PDLIM1O00151 329 aa7.96□□□□□ -1.13
SYNE1-211ENST00000413186 PLD2O14939 933 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms