RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 AKTIPQ9H8T0 292 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 HHATLQ9HCP6 504 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 UBQLN4Q9NRR5 601 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 FBXO34Q9NWN3 711 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 NOP53Q9NZM5 478 aaKnown RBP12.03□□□□□ -0.48
SDF4-203ENST00000403997 CRIM1Q9NZV1 1036 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 CLCF1Q9UBD9 225 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 FAF1Q9UNN5 650 aaPredicted RBP12.03□□□□□ -0.48
SDF4-203ENST00000403997 RAP2CQ9Y3L5 183 aa12.03□□□□□ -0.48
SDF4-203ENST00000403997 SPG11Q96JI7 2443 aa12.02□□□□□ -0.48
SDF4-203ENST00000403997 PDZD2O15018 2839 aa12.02□□□□□ -0.48
SDF4-203ENST00000403997 IGLV3-32A0A0A0MS00 114 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 ALG1L2C9J202 215 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 SEC14L5O43304 696 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 SNUPNO95149 360 aaKnown RBP12.02□□□□□ -0.49
SDF4-203ENST00000403997 TGM6O95932 706 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 NGFRP08138 427 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 BGNP21810 368 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 LCN1P31025 176 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 RPL14P50914 215 aaKnown RBP12.02□□□□□ -0.49
SDF4-203ENST00000403997 TP53BP2Q13625 1128 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 MPP2Q14168 576 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 SMU1Q2TAY7 513 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 TNFAIP8L3Q5GJ75 292 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 HHATQ5VTY9 493 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 CDC73Q6P1J9 531 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 LUZP2Q86TE4 346 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 RIMKLAQ8IXN7 391 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 OR56A1Q8NGH5 318 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 ADAMTS15Q8TE58 950 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 FAM222BQ8WU58 562 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 CDS1Q92903 461 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 PGM2Q96G03 612 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 STACQ99469 402 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 DUSP26Q9BV47 211 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 SFXN3Q9BWM7 321 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 ACTRT3Q9BYD9 372 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 BHLHE41Q9C0J9 482 aaPredicted RBP12.02□□□□□ -0.49
SDF4-203ENST00000403997 PIGUQ9H490 435 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 CXorf36Q9H7Y0 433 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 DUSP22Q9NRW4 184 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 DNAJB12Q9NXW2 375 aaKnown RBP12.02□□□□□ -0.49
SDF4-203ENST00000403997 JKAMPQ9P055 326 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 ACTL7BQ9Y614 415 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 CCDC168Q8NDH2 2452 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 CSMD2Q7Z408 3487 aa12.02□□□□□ -0.49
SDF4-203ENST00000403997 TUBAL3A6NHL2 446 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 SLC22A20A6NK97 555 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 SHISA8B8ZZ34 492 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 H0YC42 278 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 SCDO00767 359 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 HCRTR2O43614 444 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 CTAG2O75638 210 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 ATP6V1C1P21283 382 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 SOAT1P35610 550 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 CPA2P48052 419 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 SUCLG1P53597 346 aaKnown RBP12.01□□□□□ -0.49
SDF4-203ENST00000403997 TPD52P55327 224 aaPredicted RBP12.01□□□□□ -0.49
SDF4-203ENST00000403997 CLDN15P56746 228 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 EEF1A1P68104 462 aaKnown RBP12.01□□□□□ -0.49
SDF4-203ENST00000403997 FLYWCH1Q4VC44 716 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 EXOSC6Q5RKV6 272 aaKnown RBP12.01□□□□□ -0.49
SDF4-203ENST00000403997 EEF1A1P5Q5VTE0 462 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 ANKRD42Q8N9B4 389 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 PSMA8Q8TAA3 256 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 SORT1Q99523 831 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 GPATCH1Q9BRR8 931 aaKnown RBP12.01□□□□□ -0.49
SDF4-203ENST00000403997 RBM24Q9BX46 236 aaKnown RBP12.01□□□□□ -0.49
SDF4-203ENST00000403997 PINK1Q9BXM7 581 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 POLDIP3Q9BY77 421 aaKnown RBP12.01□□□□□ -0.49
SDF4-203ENST00000403997 PIGMQ9H3S5 423 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 NEUROD4Q9HD90 331 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 GIN1Q9NXP7 522 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 ASIC5Q9NY37 505 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 STOML1Q9UBI4 398 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 VDAC3Q9Y277 283 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 TACC2O95359 2948 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 MED12LQ86YW9 2145 aa12.01□□□□□ -0.49
SDF4-203ENST00000403997 TNFRSF21O75509 655 aa12□□□□□ -0.49
SDF4-203ENST00000403997 SOX30O94993 753 aa12□□□□□ -0.49
SDF4-203ENST00000403997 KRT16P08779 473 aa12□□□□□ -0.49
SDF4-203ENST00000403997 CLDN20P56880 219 aa12□□□□□ -0.49
SDF4-203ENST00000403997 C21orf58P58505 322 aa12□□□□□ -0.49
SDF4-203ENST00000403997 RPS3AP61247 264 aaKnown RBP12□□□□□ -0.49
SDF4-203ENST00000403997 HBA1P69905 142 aa12□□□□□ -0.49
SDF4-203ENST00000403997 SGCBQ16585 318 aa12□□□□□ -0.49
SDF4-203ENST00000403997 OR4F3Q6IEY1 312 aa12□□□□□ -0.49
SDF4-203ENST00000403997 OR2A2Q6IF42 318 aa12□□□□□ -0.49
SDF4-203ENST00000403997 BHLHB9Q6PI77 547 aa12□□□□□ -0.49
SDF4-203ENST00000403997 CAMKMTQ7Z624 323 aa12□□□□□ -0.49
SDF4-203ENST00000403997 MISPQ8IVT2 679 aa12□□□□□ -0.49
SDF4-203ENST00000403997 KIRREL3Q8IZU9 778 aa12□□□□□ -0.49
SDF4-203ENST00000403997 OR5AK3PQ8NH89 298 aa12□□□□□ -0.49
SDF4-203ENST00000403997 LINC01560Q8TB33 94 aa12□□□□□ -0.49
SDF4-203ENST00000403997 SFXN5Q8TD22 340 aa12□□□□□ -0.49
SDF4-203ENST00000403997 FIG4Q92562 907 aa12□□□□□ -0.49
SDF4-203ENST00000403997 NRGNQ92686 78 aa12□□□□□ -0.49
SDF4-203ENST00000403997 MOAP1Q96BY2 351 aa12□□□□□ -0.49
SDF4-203ENST00000403997 SH3YL1Q96HL8 342 aaPredicted RBP12□□□□□ -0.49
SDF4-203ENST00000403997 NUF2Q9BZD4 464 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms