RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 RFX3P48380 749 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 ZNF140P52738 457 aaPredicted RBP11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 IHHQ14623 411 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 TMEM132DQ14C87 1099 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 CPSF6Q16630 551 aaKnown RBP eCLIP11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 ODF4Q2M2E3 257 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 LIPNQ5VXI9 398 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 ZC3H14Q6PJT7 736 aaKnown RBP11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 TMPRSS11BQ86T26 416 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 ZNF561Q8N587 486 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 DNAAF1Q8NEP3 725 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 POC1BQ8TC44 478 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 RAB3CQ96E17 227 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 KLHL5Q96PQ7 755 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 SLC2A13Q96QE2 648 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 ARHGAP9Q9BRR9 750 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 FAM117AQ9C073 453 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 KLHL31Q9H511 634 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 NOX3Q9HBY0 568 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 PXMP2Q9NR77 195 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 SEMA3GQ9NS98 782 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 TAS2R13Q9NYV9 303 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 PCDHB9Q9Y5E1 797 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 IFITM10A6NMD0 228 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 H7C1Q1 480 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 SLC28A2O43868 658 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 FADS1O60427 444 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 ELNP15502 786 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 ADH7P40394 386 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 HCCSP53701 268 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 NUTF2P61970 127 aaKnown RBP11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 TAP2Q03519 686 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 SF1Q15637 639 aaKnown RBP11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 LRRC37A5PQ49AS3 106 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 TCEAL6Q6IPX3 200 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 PGBD2Q6P3X8 592 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 THEM5Q8N1Q8 247 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 RNF175Q8N4F7 328 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 SLC44A3Q8N4M1 653 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 ARIH2OSQ8N7S6 290 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 OR6K3Q8NGY3 331 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 C2orf88Q9BSF0 95 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 NT5MQ9NPB1 228 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 MOKQ9UQ07 419 aa11.74□□□□□ -0.53
SLC28A1-203ENST00000394573 MOXD2PA6NHM9 499 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 M0QZ92 97 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 AP4M1O00189 453 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 FOXE1O00358 373 aaPredicted RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 SNRPBP14678 240 aaKnown RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 ZNF25P17030 456 aaPredicted RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 AP3S2P59780 193 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 SELENOWP63302 87 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 KLF9Q13886 244 aaPredicted RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 RSU1Q15404 277 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 SYT14P1Q58G82 188 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 LIPJQ5W064 366 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 PAPD4Q6PIY7 484 aaKnown RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 APOOLQ6UXV4 268 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 BAIAP2L2Q6UXY1 529 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 LRRC18Q8N456 261 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 UBAC2Q8NBM4 344 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 OR51S1Q8NGJ8 323 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 SLC22A18Q96BI1 424 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 KCTD12Q96CX2 325 aaKnown RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 TKTL2Q9H0I9 626 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 ZNF302Q9NR11 478 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 A0A1W2PPH5 198 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 A0A1W2PPK0 400 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 A0A1W2PRB8 838 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 HMSDA8MTL9 139 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 YY2O15391 372 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 PRICKLE3O43900 615 aaPredicted RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 OR2A4O95047 310 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 HLA-DPB1P04440 258 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 UBCP0CG48 685 aaKnown RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 AGAP20933 346 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 HTR2AP28223 471 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 CCND3P30281 292 aaPredicted RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 DAOAP59103 153 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 LSM6P62312 80 aaKnown RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 MAD2L1Q13257 205 aaPredicted RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 IFI44LQ53G44 452 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 TMEM201Q5SNT2 666 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 GDPD4Q6W3E5 623 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 GLDNQ6ZMI3 551 aaPredicted RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 SCD5Q86SK9 330 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 OR10D4PQ8NGN7 298 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 PNPLA2Q96AD5 504 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 OR2A7Q96R45 310 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 UBL7Q96S82 380 aaPredicted RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 RNF122Q9H9V4 155 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 ALPK3Q96L96 1907 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 RTCAO00442 366 aaKnown RBP11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 KCNAB3O43448 404 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 OR10H3O60404 316 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 SH3BGRLO75368 114 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 ADH1AP07327 375 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 FOLR2P14207 255 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 GJA4P35212 333 aa11.73□□□□□ -0.53
SLC28A1-203ENST00000394573 THBS2P35442 1172 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms