RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 GCDHQ92947 438 aaPredicted RBP12.82□□□□□ -0.36
GPC6-201ENST00000377047 CHFRQ96EP1 664 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 SLC6A16Q9GZN6 736 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 NENFQ9UMX5 172 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 UBE2J1Q9Y385 318 aaPredicted RBP12.82□□□□□ -0.36
GPC6-201ENST00000377047 BTAF1O14981 1849 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 NARSO43776 548 aaKnown RBP12.82□□□□□ -0.36
GPC6-201ENST00000377047 MITFO75030 526 aaPredicted RBP12.82□□□□□ -0.36
GPC6-201ENST00000377047 RPS17P08708 135 aaKnown RBP12.82□□□□□ -0.36
GPC6-201ENST00000377047 C4AP0C0L4 1744 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 HTR3AP46098 478 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 ZNF423Q2M1K9 1284 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 C3P1Q6ZMU1 363 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 TSPAN9O75954 239 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 MMP2P08253 660 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 CPMP14384 443 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 HOXC5Q00444 222 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 LCN8Q6JVE9 175 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 XKRXQ6PP77 449 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 OPN5Q6U736 354 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 XKR5Q6UX68 686 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 OR6Q1Q8NGQ2 317 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 OR5J2Q8NH18 312 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 SLC39A13Q96H72 371 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 NTMT1Q9BV86 223 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 CXCL16Q9H2A7 254 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 EMC3Q9P0I2 261 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 DNAJB11Q9UBS4 358 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 ANKRD30BLA7E2S9 258 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 MEN1O00255 615 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 GFRA2O00451 464 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 MPPED1O15442 326 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 KIAA0513O60268 411 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 WDPCPO95876 746 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 FGF4P08620 206 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 LCN1P31025 176 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 PIP5KL1Q5T9C9 394 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 MFSD9Q8NBP5 474 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 OR51T1Q8NGJ9 327 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 ASB11Q8WXH4 323 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 MSANTD3Q96H12 275 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 OR7D2Q96RA2 312 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 PLEK2Q9NYT0 353 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 CXXC1Q9P0U4 656 aaPredicted RBP12.82□□□□□ -0.36
GPC6-201ENST00000377047 ABRACLQ9P1F3 81 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 HS3ST2Q9Y278 367 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 PCDH17O14917 1159 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 HSD17B1P14061 328 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 PTPRRQ15256 657 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 SMAD2Q15796 467 aaKnown RBP12.82□□□□□ -0.36
GPC6-201ENST00000377047 GPR149Q86SP6 731 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 BTBD2Q9BX70 525 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 CCDC86Q9H6F5 360 aaKnown RBP12.82□□□□□ -0.36
GPC6-201ENST00000377047 TMEM9Q9P0T7 183 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 PCDHB10Q9UN67 800 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 HIF3AQ9Y2N7 669 aa12.82□□□□□ -0.36
GPC6-201ENST00000377047 OR2T1O43869 369 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 DCNP07585 359 aaKnown RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 RGS19P49795 217 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 ART1P52961 327 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 TRA2BP62995 288 aaKnown RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 ADAMTS19Q8TE59 1207 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 ISOC1Q96CN7 298 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 MYADMQ96S97 322 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 TGFBR3Q03167 851 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 ANKK1Q8NFD2 765 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 KLHL15Q96M94 604 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 CTRCQ99895 268 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 ATXN1LP0C7T5 689 aaKnown RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 RPS5P46782 204 aaKnown RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 BAIAP2L2Q6UXY1 529 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 NXPE3Q969Y0 559 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 CITO14578 2027 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 FOXE1O00358 373 aaPredicted RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 FBP2O00757 339 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 ICAM2P13598 275 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 ERVK-25P63136 954 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 DCDP81605 110 aaKnown RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 MGAT3Q09327 533 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 AIMP2Q13155 320 aaKnown RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 TP53I3Q53FA7 332 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 C9orf135Q5VTT2 229 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 SFXN5Q8TD22 340 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 HDAC8Q9BY41 377 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 CHRDQ9H2X0 955 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 PAK1IP1Q9NWT1 392 aaPredicted RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 ZNF443Q9Y2A4 671 aaPredicted RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 TMEM265A0A087WTH1 108 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 RRP8O43159 456 aaKnown RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 SRPX2O60687 465 aaPredicted RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 CRTAPO75718 401 aaPredicted RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 ZNF182P17025 639 aaPredicted RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 IL32P24001 234 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 DCTP40126 519 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 PRDX1Q06830 199 aaKnown RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 UGT2A3Q6UWM9 527 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 CPOQ8IVL8 374 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 PAPOLGQ9BWT3 736 aaKnown RBP12.81□□□□□ -0.36
GPC6-201ENST00000377047 MMP27Q9H306 513 aa12.81□□□□□ -0.36
GPC6-201ENST00000377047 INIPQ9NRY2 104 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms