RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 PRR14Q9BWN1 585 aa17.95■□□□□ 0.46
CHTOP-204ENST00000368694 TOR3AQ9H497 397 aa17.95■□□□□ 0.46
CHTOP-204ENST00000368694 MRTO4Q9UKD2 239 aaKnown RBP17.95■□□□□ 0.46
CHTOP-204ENST00000368694 ACAD8Q9UKU7 415 aa17.95■□□□□ 0.46
CHTOP-204ENST00000368694 MUC6Q6W4X9 2439 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 SMIM31A0A1B0GVY4 71 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 CDHR4A6H8M9 788 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 CPSF4LA6NMK7 179 aaKnown RBP17.94■□□□□ 0.46
CHTOP-204ENST00000368694 PCDH17O14917 1159 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 FTH1P19P0C7X4 201 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 PSMD4P55036 377 aaKnown RBP17.94■□□□□ 0.46
CHTOP-204ENST00000368694 SMIM11AP58511 58 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 PDK3Q15120 406 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 HSDL2Q6YN16 418 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 APCDD1LQ8NCL9 501 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 NFAM1Q8NET5 270 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-204ENST00000368694 WDR77Q9BQA1 342 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-204ENST00000368694 TMEFF2Q9UIK5 374 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-204ENST00000368694 TMCC3Q9ULS5 477 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 KLF7O75840 302 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-204ENST00000368694 CCNB2O95067 398 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 CAPGP40121 348 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 LIMS1P48059 325 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 HMGA2P52926 109 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 ATP12AP54707 1039 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 RANBP3LQ86VV4 465 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-204ENST00000368694 TSPYL5Q86VY4 417 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-204ENST00000368694 OR9Q2Q8NGE9 314 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 OR2Y1Q8NGV0 311 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 VMP1Q96GC9 406 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 MCHR1Q99705 422 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 SEMA4CQ9C0C4 833 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 KRT84Q9NSB2 600 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 NDUFA13Q9P0J0 144 aa17.94■□□□□ 0.46
CHTOP-204ENST00000368694 TRBV4-1A0A0J9YWV2 114 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 UMODP07911 640 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 GKN3PP0CG01 181 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 ELAVL4P26378 380 aaKnown RBP17.93■□□□□ 0.46
CHTOP-204ENST00000368694 IL12BP29460 328 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 IFNA8P32881 189 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 KRT20P35900 424 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 FOLR3P41439 243 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 RNF4P78317 190 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 EPS8Q12929 822 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 GK3PQ14409 553 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 RFX4Q33E94 735 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 SLC36A3Q495N2 470 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 DCST1Q5T197 706 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 KDM4DQ6B0I6 523 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 PLEKHM3Q6ZWE6 761 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 MARVELD2Q8N4S9 558 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 OR4C3Q8NH37 302 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 DHRS1Q96LJ7 313 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 FEVQ99581 238 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 LIN28AQ9H9Z2 209 aaKnown RBP17.93■□□□□ 0.46
CHTOP-204ENST00000368694 FOXJ2Q9P0K8 574 aa17.93■□□□□ 0.46
CHTOP-204ENST00000368694 MITFO75030 526 aaPredicted RBP17.92■□□□□ 0.46
CHTOP-204ENST00000368694 REM1O75628 298 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 IL33O95760 270 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 DLGAP3O95886 979 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 GNAO1P09471 354 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 HPGDP15428 266 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 TCN2P20062 427 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 PLCXD2Q0VAA5 305 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 ZNF141Q15928 474 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 ENTPD8Q5MY95 495 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 FAHD1Q6P587 224 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 TIPARPQ7Z3E1 657 aaKnown RBP17.92■□□□□ 0.46
CHTOP-204ENST00000368694 CHERPQ8IWX8 916 aaKnown RBP17.92■□□□□ 0.46
CHTOP-204ENST00000368694 SLC5A8Q8N695 610 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 PIK3C3Q8NEB9 887 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 ADAMTS16Q8TE57 1224 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 THAP3Q8WTV1 239 aaPredicted RBP17.92■□□□□ 0.46
CHTOP-204ENST00000368694 ADOQ96SZ5 270 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 ANKRD60Q9BZ19 345 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.92■□□□□ 0.46
CHTOP-204ENST00000368694 ZNF223Q9UK11 482 aaPredicted RBP17.92■□□□□ 0.46
CHTOP-204ENST00000368694 NTNG1Q9Y2I2 539 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 PCDHGA3Q9Y5H0 932 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 SDK2Q58EX2 2172 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 TRBV11-1A0A0K0K1C0 115 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 CLIC3O95833 236 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 CHN2P52757 468 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 SLC26A5P58743 744 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 KRT80Q6KB66 452 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 ZNF527Q8NB42 609 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 ZNF555Q8NEP9 628 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 DIO2Q92813 273 aa17.92■□□□□ 0.46
CHTOP-204ENST00000368694 A0A1W2PRQ8 180 aa17.91■□□□□ 0.46
CHTOP-204ENST00000368694 NPIPB9F8W1W9 429 aa17.91■□□□□ 0.46
CHTOP-204ENST00000368694 BCAS1O75363 584 aaPredicted RBP17.91■□□□□ 0.46
CHTOP-204ENST00000368694 CD63P08962 238 aa17.91■□□□□ 0.46
CHTOP-204ENST00000368694 ANXA8P13928 327 aa17.91■□□□□ 0.46
CHTOP-204ENST00000368694 CDH2P19022 906 aaPredicted RBP17.91■□□□□ 0.46
CHTOP-204ENST00000368694 KCNAB2Q13303 367 aa17.91■□□□□ 0.46
CHTOP-204ENST00000368694 DGCR6Q14129 220 aa17.91■□□□□ 0.46
CHTOP-204ENST00000368694 FGFBP1Q14512 234 aa17.91■□□□□ 0.46
CHTOP-204ENST00000368694 OFCC1Q8IZS5 231 aa17.91■□□□□ 0.46
CHTOP-204ENST00000368694 C17orf47Q8NEP4 570 aa17.91■□□□□ 0.46
CHTOP-204ENST00000368694 FAM81AQ8TBF8 368 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms