RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 HP1BP3Q5SSJ5 553 aaPredicted RBP12.87□□□□□ -0.35
VAMP4-202ENST00000367740 LIPJQ5W064 366 aa12.87□□□□□ -0.35
VAMP4-202ENST00000367740 USP43Q70EL4 1123 aa12.87□□□□□ -0.35
VAMP4-202ENST00000367740 P2RY8Q86VZ1 359 aa12.87□□□□□ -0.35
VAMP4-202ENST00000367740 TEX9Q8N6V9 391 aa12.87□□□□□ -0.35
VAMP4-202ENST00000367740 ZNF540Q8NDQ6 660 aa12.87□□□□□ -0.35
VAMP4-202ENST00000367740 OSTF1Q92882 214 aa12.87□□□□□ -0.35
VAMP4-202ENST00000367740 MRPL1Q9BYD6 325 aaKnown RBP12.87□□□□□ -0.35
VAMP4-202ENST00000367740 NUDT4Q9NZJ9 180 aa12.87□□□□□ -0.35
VAMP4-202ENST00000367740 PCDHB10Q9UN67 800 aa12.87□□□□□ -0.35
VAMP4-202ENST00000367740 OR10H1Q9Y4A9 318 aa12.87□□□□□ -0.35
VAMP4-202ENST00000367740 FOXE1O00358 373 aaPredicted RBP12.86□□□□□ -0.35
VAMP4-202ENST00000367740 BCAS2O75934 225 aaPredicted RBP12.86□□□□□ -0.35
VAMP4-202ENST00000367740 YES1P07947 543 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 TACSTD2P09758 323 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 SHC1P29353 583 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 OR3A2P47893 321 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 PIK3CGP48736 1102 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 CHN2P52757 468 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 MAPK12P53778 367 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 DVL1P1P54792 670 aaPredicted RBP12.86□□□□□ -0.35
VAMP4-202ENST00000367740 ATP6V0D1P61421 351 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 PSG6Q00889 435 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 CCNYL2Q5T2Q4 361 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 STEAP4Q687X5 459 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 ANKS4BQ8N8V4 417 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 HPS1Q92902 700 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 ERP27Q96DN0 273 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 KLHL15Q96M94 604 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 RNF145Q96MT1 663 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 RHOJQ9H4E5 214 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 GP6Q9HCN6 339 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 ADAM29Q9UKF5 820 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 CHMP2BQ9UQN3 213 aa12.86□□□□□ -0.35
VAMP4-202ENST00000367740 NPIPA5A0A0B4J1W7 369 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 C7orf72A4D263 438 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 NPIPA7E9PJI5 369 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 LILRA1O75019 489 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 ANGPTL1O95841 491 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 NPIPA8P0DM63 369 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 PCMT1P22061 227 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 APOBEC3AP31941 199 aaPredicted RBP12.85□□□□□ -0.35
VAMP4-202ENST00000367740 ELK3P41970 407 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 LIMS1P48059 325 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 CARD18P57730 90 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 CSTF3Q12996 717 aaKnown RBP12.85□□□□□ -0.35
VAMP4-202ENST00000367740 ERCC6LQ2NKX8 1250 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 PDSS1Q5T2R2 415 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 KLHL17Q6TDP4 642 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 APOOLQ6UXV4 268 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 FCRLAQ7L513 359 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 TMEM139Q8IV31 216 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 RNF214Q8ND24 703 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 OR9A2Q8NGT5 310 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 OR52N5Q8NH56 324 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 SLC9A6Q92581 669 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 CPNE4Q96A23 557 aaPredicted RBP12.85□□□□□ -0.35
VAMP4-202ENST00000367740 FBXO17Q96EF6 278 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 REXO5Q96IC2 774 aaKnown RBP12.85□□□□□ -0.35
VAMP4-202ENST00000367740 SERPINI1Q99574 410 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 ALG9Q9H6U8 611 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 MYNNQ9NPC7 610 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 ING1Q9UK53 422 aaPredicted RBP12.85□□□□□ -0.35
VAMP4-202ENST00000367740 GUCA1BQ9UMX6 200 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 SLC25A15Q9Y619 301 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 ATP23Q9Y6H3 246 aa12.85□□□□□ -0.35
VAMP4-202ENST00000367740 A0A087WZY1 265 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 SUPT3HB4E1H0 165 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 M0R1B8 84 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 UBXN8O00124 270 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 NDUFB5O43674 189 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 SUPT3HO75486 399 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 PRKD3O94806 890 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 ME2P23368 584 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 CXCR5P32302 372 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 SLC12A2P55011 1212 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 PHC1P78364 1004 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 POU4F1Q01851 419 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 MGAT5Q09328 741 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 C17orf67Q0P5P2 114 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 ZNF155Q12901 538 aaPredicted RBP12.84□□□□□ -0.35
VAMP4-202ENST00000367740 SCGB2A2Q13296 93 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 FRG1Q14331 258 aaKnown RBP12.84□□□□□ -0.35
VAMP4-202ENST00000367740 PLPPR5Q32ZL2 321 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 SH2D4BQ5SQS7 431 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 PAGE2Q7Z2X7 111 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 CCDC116Q8IYX3 515 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 ZNF433Q8N7K0 673 aaPredicted RBP12.84□□□□□ -0.35
VAMP4-202ENST00000367740 POC1BQ8TC44 478 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 FAM110BQ8TC76 370 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 MRPL24Q96A35 216 aaKnown RBP12.84□□□□□ -0.35
VAMP4-202ENST00000367740 MAGOHBQ96A72 148 aaKnown RBP12.84□□□□□ -0.35
VAMP4-202ENST00000367740 ZBTB8AQ96BR9 441 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 UBXN10Q96LJ8 280 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 SNX18Q96RF0 628 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 ATOH8Q96SQ7 321 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 CXorf36Q9H7Y0 433 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 MTO1Q9Y2Z2 717 aaKnown RBP12.84□□□□□ -0.35
VAMP4-202ENST00000367740 RNF11Q9Y3C5 154 aa12.84□□□□□ -0.35
VAMP4-202ENST00000367740 ZNF780BQ9Y6R6 833 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms