RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 B4GALT1P15291 398 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CRISP2P16562 243 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 HOXA9P31269 272 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 KRT20P35900 424 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CCR6P51684 374 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SNU13P55769 128 aaKnown RBP0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 HERV-K104P63124 156 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SLC10A7Q0GE19 358 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 FUT7Q11130 342 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 NME3Q13232 169 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 KBTBD12Q3ZCT8 623 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 PIGGQ5H8A4 983 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 BEND6Q5SZJ8 279 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 NKAIN2Q5VXU1 208 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 KCTD11Q693B1 232 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SLC22A16Q86VW1 577 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 ZNF695Q8IW36 515 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CCDC83Q8IWF9 413 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 PEX5LQ8IYB4 626 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 ZNF709Q8N972 641 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 NEK11Q8NG66 645 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 OR4F17Q8NGA8 305 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SELENOMQ8WWX9 145 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CORO2AQ92828 525 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 RNF185Q96GF1 192 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 OR2M2Q96R28 347 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 OR4F4Q96R69 305 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 NTMT1Q9BV86 223 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 AP1M1Q9BXS5 423 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 EDEM3Q9BZQ6 932 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 TSPYL1Q9H0U9 437 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 TRPV6Q9H1D0 765 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 DUS2Q9NX74 493 aaKnown RBP0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 RBAKQ9NYW8 714 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 NARFQ9UHQ1 456 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 NRBP1Q9UHY1 535 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 FOXA2Q9Y261 457 aaPredicted RBP0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 MMACHCQ9Y4U1 282 aa0.8□□□□□ -2.28
RNU6-1048P-201ENST00000364054 TTI1O43156 1089 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SDC3O75056 442 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SCRG1O75711 98 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 RETP07949 1114 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 RHOXF2BP0C7M4 288 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SLC35G4P0C7Q5 338 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CELP19835 753 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 TMOD1P28289 359 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CD34P28906 385 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 PLK1P53350 603 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 RAG2P55895 527 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CSNK1G2P78368 415 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CCZ1BP86790 482 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CCZ1P86791 482 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 VLDLRP98155 873 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CLPPQ16740 277 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 KRTAP13-2Q52LG2 175 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 DNAJC21Q5F1R6 531 aaKnown RBP0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CASC10Q5T4H9 136 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 TRAT1Q6PIZ9 186 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 LRRC70Q7Z2Q7 622 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CAMK2N1Q7Z7J9 78 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 VPS36Q86VN1 386 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 HOOK3Q86VS8 718 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SERPINA9Q86WD7 417 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 GPBP1Q86WP2 473 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 VRK2Q86Y07 508 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 STHQ8IWL8 128 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 LSMEM1Q8N8F7 131 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 AENQ8WTP8 325 aaKnown RBP0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 FAM151AQ8WW52 585 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 MRPL53Q96EL3 112 aaKnown RBP0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CEP170P1Q96L14 293 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 NOL4LQ96MY1 436 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 GPR137Q96N19 417 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 RASL11BQ9BPW5 248 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 DDX50Q9BQ39 737 aaKnown RBP0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 THUMPD3Q9BV44 507 aaKnown RBP0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 UTP14AQ9BVJ6 771 aaKnown RBP0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 ALDH8A1Q9H2A2 487 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CAB39LQ9H9S4 337 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 MEPEQ9NQ76 525 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 ANKMY1Q9P2S6 941 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 ASF1AQ9Y294 204 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 PLLPQ9Y342 182 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 EXOSC1Q9Y3B2 195 aaKnown RBP0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 NEUROG3Q9Y4Z2 214 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 COL5A1P20908 1838 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 PTPRUQ92729 1446 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 PLA2R1Q13018 1463 aa0.79□□□□□ -2.28
RNU6-1048P-201ENST00000364054 THSD7BQ9C0I4 1608 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 ITGB4P16144 1822 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 H0YIG0 161 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 ATP6V1G1O75348 118 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 KIAA0754O94854 1291 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SLITRK3O94933 977 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 CTDNEP1O95476 244 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 PNPP00491 289 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 HSP90AB1P08238 724 aaKnown RBP0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 BCKDHAP12694 445 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 SCG2P13521 617 aa0.78□□□□□ -2.28
RNU6-1048P-201ENST00000364054 H2AFXP16104 143 aaPredicted RBP0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms