RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 CDH12P55289 794 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 RGS8P57771 180 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 SMIM11AP58511 58 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 PSPHP78330 225 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 GABREP78334 506 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 CAMK2BQ13554 666 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 FAM199XQ6PEV8 388 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 TBPL2Q6SJ96 375 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 TMEM179BQ7Z7N9 219 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 C9orf40Q8IXQ3 194 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 TAGAPQ8N103 731 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 ESX1Q8N693 406 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 BCORP1Q8N888 145 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 OR4N2Q8NGD1 307 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 MAGEE2Q8TD90 523 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 OIT3Q8WWZ8 545 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 ADIPOR1Q96A54 375 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 VMP1Q96GC9 406 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 PRRC1Q96M27 445 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 RSPO3Q9BXY4 272 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 FAM117AQ9C073 453 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 WWTR1Q9GZV5 400 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 AKIRIN1Q9H9L7 192 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 FBXO34Q9NWN3 711 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 SMPD3Q9NY59 655 aaPredicted RBP12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 PADI1Q9ULC6 663 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 PPIEQ9UNP9 301 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 LYVE1Q9Y5Y7 322 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 AP4B1Q9Y6B7 739 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 TEP1Q99973 2627 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 PTPN13Q12923 2485 aa12.79□□□□□ -0.36
PDLIM5-203ENST00000359265 PTPRQQ9UMZ3 2332 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 TEX51A0A1B0GUA7 166 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 A0A1W2PNU3 283 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 PMS2P1A4D2B8 440 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 J3KTA2 159 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 PEX12O00623 359 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 UGT2B17O75795 530 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 EPPINO95925 133 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 IGKV1D-16P01601 117 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 ALPLP05186 524 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 LCN1P31025 176 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 KRT20P35900 424 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 EEF1A1P68104 462 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 PPP2R2BQ00005 443 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 EPS8Q12929 822 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 PPP1R8Q12972 351 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 ZNF141Q15928 474 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 ZSWIM7Q19AV6 140 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 COLEC12Q5KU26 742 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 MRPL2Q5T653 305 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 IGF2-ASQ6U949 168 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 COMTD1Q86VU5 262 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 LACC1Q8IV20 430 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 C17orf47Q8NEP4 570 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 NFAM1Q8NET5 270 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 OR4D11Q8NGI4 311 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 OR4C15Q8NGM1 316 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 OR2Y1Q8NGV0 311 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 ZG16BQ96DA0 208 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 HSPBAP1Q96EW2 488 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 RDH12Q96NR8 316 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 SEMA4CQ9C0C4 833 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 NXF5Q9H1B4 397 aaKnown RBP12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 PDP1Q9P0J1 537 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 KIF17Q9P2E2 1029 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 KCND3Q9UK17 655 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 ACAD8Q9UKU7 415 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 ORC6Q9Y5N6 252 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 COL6A6A6NMZ7 2263 aa12.78□□□□□ -0.36
PDLIM5-203ENST00000359265 LOC102723996A0A087X1L8 192 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 C7orf72A4D263 438 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 STMND1H3BQB6 276 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 AP3D1O14617 1153 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 TO15178 435 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 HS6ST1O60243 411 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 SEC24DO94855 1032 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 WISP1O95388 367 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 IL33O95760 270 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 H1F0P07305 194 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 RAB40ALP0C0E4 278 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 THRBP10828 461 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 IFNA8P32881 189 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 GPR143P51810 404 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 ATP12AP54707 1039 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 RAD23AP54725 363 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 SLC26A5P58743 744 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 GANABQ14697 944 aaKnown RBP12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 RFX4Q33E94 735 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 TCTN3Q6NUS6 607 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 ZAR1Q86SH2 424 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 RANBP3LQ86VV4 465 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 HS3ST5Q8IZT8 346 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 NLGN4XQ8N0W4 816 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 ZNF614Q8N883 585 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 PIK3C3Q8NEB9 887 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 NLGN4YQ8NFZ3 816 aaPredicted RBP12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 OR6T1Q8NGN1 323 aa12.77□□□□□ -0.37
PDLIM5-203ENST00000359265 GIPC3Q8TF64 312 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms