RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 NSUN5Q96P11 429 aaKnown RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 KCMF1Q9P0J7 381 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 DEFA4P12838 97 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 EXOSC6Q5RKV6 272 aaKnown RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 EMC10Q5UCC4 262 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 RHEBL1Q8TAI7 183 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 DEDD2Q8WXF8 326 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 CHFRQ96EP1 664 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 AK6Q9Y3D8 172 aaKnown RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 ZNF736B4DX44 427 aaPredicted RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 TRAPPC2LH3BP13 241 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 TOR1AO14656 332 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 GLO1Q04760 184 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 SLC22A25Q6T423 547 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 PAPD5Q8NDF8 572 aaKnown RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 TMEM185AQ8NFB2 350 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 OR51L1Q8NGJ5 315 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 GAB3Q8WWW8 586 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 TMEM19Q96HH6 336 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 SLC7A7Q9UM01 511 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 TSPAN11A1L157 253 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 RPS18P62269 152 aaKnown RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 ERVK-25P63136 954 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 ZDHHC24Q6UX98 284 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 DMBX1Q8NFW5 382 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 MS4A4EQ96PG1 132 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 ZNF92Q03936 586 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 SLC22A6Q4U2R8 563 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 OR7G1Q8NGA0 311 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 OR5D16Q8NGK9 328 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 PRDM9Q9NQV7 894 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 MED16Q9Y2X0 877 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 KDM4FA0A1W2PPD8 638 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 OR2T27Q8NH04 317 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 PSMF1Q92530 271 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 AMDHD1Q96NU7 426 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 NECTIN4Q96NY8 510 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 TPPP3Q9BW30 176 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 GNB4Q9HAV0 340 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 SALL3Q9BXA9 1300 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 GABARAPH6UMI1 98 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 MSTNO14793 375 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 GPR137BO60478 399 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 GABARAPO95166 117 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 APOA2P02652 100 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 VIPR2P41587 438 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 NR0B2Q15466 257 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 FAM182AQ5T1J6 154 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 WASH4PA8MWX3 477 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 FAM189A1O60320 539 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 XCR1P46094 333 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 ZMYND19Q96E35 227 aaPredicted RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 C20orf202A1L168 122 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 GSTP1P09211 210 aaKnown RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 KDELR2P33947 212 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 MPPED2Q15777 294 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 C3orf58Q8NDZ4 430 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 OR4N2Q8NGD1 307 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 OR5W2Q8NH69 310 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 ZNF334Q9HCZ1 680 aaPredicted RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 K7EPK0 472 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 SIM1P81133 766 aaPredicted RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 ARHGAP1Q07960 439 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 DEFB110Q30KQ9 67 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 FAM71E2Q8N5Q1 922 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 NT5C3BQ969T7 300 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 TK1P04183 234 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 RPS17P08708 135 aaKnown RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 SQSTM1Q13501 440 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 MSS51Q4VC12 460 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 PLD6Q8N2A8 252 aaKnown RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 CA5BQ9Y2D0 317 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 Q9Y3F1 56 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 A0A1W2PQL4 384 aaPredicted RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 MMP2P08253 660 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 TRAPPC13A5PLN9 417 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 GJA5P36382 358 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 CNN3Q15417 329 aaKnown RBP5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 KDM1BQ8NB78 822 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 SLC23A2Q9UGH3 650 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 ITGB2P05107 769 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 GRIN2CQ14957 1233 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 RETREG1Q9H6L5 497 aa5.47□□□□□ -1.53
SRGAP1-201ENST00000355086 KCNE1P15382 129 aa5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 CERS1P27544 350 aa5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 MAGEB1P43366 347 aa5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 HOXA1P49639 335 aaPredicted RBP5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 CCBE1Q6UXH8 406 aaPredicted RBP5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 LIPHQ8WWY8 451 aa5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 C1orf74Q96LT6 269 aa5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 SOX17Q9H6I2 414 aaPredicted RBP5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 IER3IP1Q9Y5U9 82 aa5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 SULT2B1O00204 365 aa5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 TACR3P29371 465 aa5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 SPINT3P49223 89 aa5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 RAB11AP62491 216 aa5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 MKXQ8IYA7 352 aa5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 BTBD2Q9BX70 525 aa5.46□□□□□ -1.53
SRGAP1-201ENST00000355086 SLC17A9Q9BYT1 436 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms