RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 OR10A4Q9H209 315 aa6.35□□□□□ -1.39
CAST-203ENST00000338252 MROH8Q9H579 483 aa6.35□□□□□ -1.39
CAST-203ENST00000338252 TCF7L1Q9HCS4 588 aa6.35□□□□□ -1.39
CAST-203ENST00000338252 ZNF69Q9UC07 566 aa6.35□□□□□ -1.39
CAST-203ENST00000338252 ST3GAL5Q9UNP4 418 aa6.35□□□□□ -1.39
CAST-203ENST00000338252 OARD1Q9Y530 152 aa6.35□□□□□ -1.39
CAST-203ENST00000338252 KCNE1BA0A087WTH5 132 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 IQCF5A8MTL0 148 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 WASH3PC4AMC7 463 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 TNFRSF10BO14763 440 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 PRMT3O60678 531 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 STX11O75558 287 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 ITGA10O75578 1167 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 IGHV2-5P01817 119 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 UBBP0CG47 229 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 UBCP0CG48 685 aaKnown RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 LAMP1P11279 417 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 CCR9P51686 369 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 RPS27AP62979 156 aaKnown RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 UBA52P62987 128 aaKnown RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 BOP1Q14137 746 aaKnown RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 RNASE12Q5GAN4 147 aaKnown RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 COX20Q5RI15 118 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 FAM69AQ5T7M9 428 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 ZNF697Q5TEC3 545 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 SFRP4Q6FHJ7 346 aaPredicted RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 PLPPR4Q7Z2D5 763 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 SLC9B2Q86UD5 537 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 FBXO15Q8NCQ5 510 aaPredicted RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 TRMT10AQ8TBZ6 339 aaKnown RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 THEM6Q8WUY1 208 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 ASZ1Q8WWH4 475 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 FCRL2Q96LA5 508 aaPredicted RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 NEU1Q99519 415 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 TMEM39BQ9GZU3 492 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.34□□□□□ -1.39
CAST-203ENST00000338252 BRD9Q9H8M2 597 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 CACYBPQ9HB71 228 aaKnown RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 TAS2R5Q9NYW4 299 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 NFKBIL1Q9UBC1 381 aaPredicted RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 KIAA1671Q9BY89 1806 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 FXYD6-FXYD2A0A087WZ82 144 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 IRGMA1A4Y4 181 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 LRIT2A6NDA9 550 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 SNRPGP15A8MWD9 76 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 C5orf58C9J3I9 102 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 LRRN3E7EW58 273 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 ARPC1BO15143 372 aaKnown RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 CTDSPLO15194 276 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 PRODHO43272 600 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 RECQL4O94761 1208 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 CLDN9O95484 217 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 C22orf31O95567 290 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 LY86O95711 162 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 RD3LP0DJH9 198 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 COX7A2P14406 83 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 MGMTP16455 207 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 NDUFB7P17568 137 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 NDUFV2P19404 249 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 ELAVL4P26378 380 aaKnown RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 NUP214P35658 2090 aaPredicted RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 OAZ1P54368 228 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 PITPNAQ00169 270 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 FABP9Q0Z7S8 132 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 SCARB2Q14108 478 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 TTLL4Q14679 1199 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 SMCO1Q147U7 214 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 TMEM132BQ14DG7 1078 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 CPSF6Q16630 551 aaKnown RBP eCLIP6.34□□□□□ -1.39
CAST-203ENST00000338252 TMEM44Q2T9K0 475 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 KIAA1161Q6NSJ0 714 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 PGBD2Q6P3X8 592 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 METTL7BQ6UX53 244 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 UMODL1-AS1Q8N2C9 162 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 LNX2Q8N448 690 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 OR4K2Q8NGD2 314 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 CSGALNACT1Q8TDX6 532 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 SMIM4Q8WVI0 70 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 CPNE4Q96A23 557 aaPredicted RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 HMCESQ96FZ2 354 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 ZBED3Q96IU2 234 aaPredicted RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 APOLD1Q96LR9 279 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 OR1F2PQ96R84 312 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 TRIB3Q96RU7 358 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 TM6SF2Q9BZW4 377 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 FXYD6Q9H0Q3 95 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 TLNRD1Q9H1K6 362 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 SLC38A1Q9H2H9 487 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 LRRN3Q9H3W5 708 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 HRASLSQ9HDD0 168 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 C1GALT1Q9NS00 363 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 ZNF70Q9UC06 446 aaPredicted RBP6.34□□□□□ -1.39
CAST-203ENST00000338252 CPA4Q9UI42 421 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 DHRS7Q9Y394 339 aa6.34□□□□□ -1.39
CAST-203ENST00000338252 ANHXE9PGG2 379 aa6.33□□□□□ -1.4
CAST-203ENST00000338252 RFXAPO00287 272 aa6.33□□□□□ -1.4
CAST-203ENST00000338252 PPIHO43447 177 aaKnown RBP6.33□□□□□ -1.4
CAST-203ENST00000338252 CREBL2O60519 120 aaPredicted RBP6.33□□□□□ -1.4
CAST-203ENST00000338252 RGS9O75916 674 aaPredicted RBP6.33□□□□□ -1.4
CAST-203ENST00000338252 F12P00748 615 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms